Protein Info for HP15_2154 in Marinobacter adhaerens HP15
Annotation: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: None (inferred from 67% identity to avn:Avin_49950)Predicted SEED Role
"Glyceraldehyde-3-phosphate dehydrogenase, putative"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See E4PF38 at UniProt or InterPro
Protein Sequence (543 amino acids)
>HP15_2154 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (Marinobacter adhaerens HP15) MDPTRWMQTTFFPKETDVPEEFREGGVNLNHTLVGGELRPWDGSYAEVRSPICSAAQGDG VPQPLLIGRTPLMDEAAALEALDAAVQAYGQGSGDWPSMSVANRIEHVEQFLAEMRNHRE AVVKLLMWEIGKTRKDACKEFDRTCDYINDTIHELKVLDRRSSRFEIVGGVVAQTRRLPV GVALCMGPFNYPLNETFTTLIPALIMGNTVVFKPAKYGVLLIGPLMDAFRKSFPPGVINI IFGRGRDTVGPLMESGKVDMFAFIGTHRGASALKQMHPKPHRLKAVLGLDANNPAIVLPD ADFELAVSECISGALSFNGQRCTALKLLFVHDSLADQFVSKLSDAVNELVAGMPWEQDVS LTPLPEPGKIGFLRELVDDAIAKGASVVNECGGEVNGTYFHPAVLYPVTAEMRIYHEEQF GPVIPVAAFSDEQEVIEHVRDSSFGQQLSIFGSDSDTVGRLIDLLANQVGRINLNAQCQR GPDTLPFNGRKDSAEGTLSVSDALRVFSIRTTVATKSSESNRDLVTGIVRGRSSKILTTD YLF