Protein Info for PGA1_c22230 in Phaeobacter inhibens DSM 17395

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1266 PF13289: SIR2_2" amino acids 129 to 265 (137 residues), 49 bits, see alignment E=3.6e-17

Best Hits

KEGG orthology group: None (inferred from 63% identity to csa:Csal_0740)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7E2F0 at UniProt or InterPro

Protein Sequence (1266 amino acids)

>PGA1_c22230 hypothetical protein (Phaeobacter inhibens DSM 17395)
MRFHANGPIIPDVLLERSDAGRVVFLCGAGVSLPSGMPSFIGLTQHVIDFFDPPEDSEIM
RAFQPWIDDPTGTNTPLDHIFNLLHLEYGRDEVNALVTERLQASAGSGQVGHHHSVVKRI
STSPNGIPQIVTTNFDLLFEMDGDLPTFAPPAFPDLTFGRSVEGITYLHGRLANEDANQL
PYVLSSADFGRAYLSEAWATNFIRNLLEHYTVVLVGYQAEDPPIKYLLQGLNHDGQFDRT
RIYAFDKGAPEDIEAKWRDRGVTAIAYSDHPDLWQTMEAWADRADDPREWRRVVIATTEQ
DPKSLLPYQRGQVAHVVRSVPGAKLLGDAQHPTHPEWVCVFSGFIRSAKRASGYGDDAEV
FEPNVGYGLDDDLHNLTDDDYRRGISNEDLFSWRHGDENPTDAHRLGGKAPDGHTSVPPR
LLYLLRWVGKHLSSPVIAWWAIKQNGLHPRLLNHIEWRLGQNEELDDRARQIWSLIIDHH
KDPRNREWDGDWFDLKRRVANEGWSPSVLREFGRVAAPKLDIKPPHSLAGARPPSVDWPD
LELGHLGQFEVNFLERHKDDLTIPDEVLPQVFGLLEDAMKATSGMLSDIGKTYFVTPTCY
PDREVDGKDRHNKAADAMKFFVELFERLVQTAPDIALGHFLTWPIEDQFFFKKLILYALS
KEDLFGPEEVGERILALRQETFWNSDVARELVFLLVDRWSAFPEPLRYQLGERLLSGPDQ
ESYWSDEVYPSRRDEIVARYARYLEMQGCELVGDQGERLAAVIDGIEDWSDGWATSTVTE
RGSRVGYVGTDETPDVVVDLAVGEIIPRAKEDLQRDFGSFTEKRPFTGLVKANPRKALSA
LSVAAKENDYPQVFWSAMIKELPDDVEPRLQRVFLHRLSRLPPAVIVELRHTVCRWLEQN
ITKLIEFNDELAWAVFDNVVDGVVGGGDNATESGIGEVSRDGEVIPQSRRTYEHAINGPL
GMCAEALFHAVPSEKQEQNLLIPDYIKSRIERLFASPGEGSDHAVSITFSKLNWLMFVDP
EWVEHRLIPMLAFDHTAAEPAWNGFLCSNRVPWPPLAVLIKPLLLQAVPWVENQTWDRDL
AMVIAQWLGWMYIFKRDEDDGLTKQEMRRVLREMSDDTRNQFIWWLGQVGQGNDDGWETL
VAPFLNEVWPREHIYRTASSVESWISMLDDTGTSFPVVYASVKRYLVPVENDRHPFYRFT
REVGEDEPITMQFPVETLDLLDSVIPKVLSRTPYDLPKILMLVSEAAPDLRADHRYLRLM
DLVERM