Protein Info for HP15_2133 in Marinobacter adhaerens HP15

Annotation: solute symporter-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 454 transmembrane" amino acids 6 to 23 (18 residues), see Phobius details amino acids 44 to 61 (18 residues), see Phobius details amino acids 72 to 95 (24 residues), see Phobius details amino acids 126 to 147 (22 residues), see Phobius details amino acids 153 to 172 (20 residues), see Phobius details amino acids 183 to 201 (19 residues), see Phobius details amino acids 214 to 234 (21 residues), see Phobius details amino acids 255 to 278 (24 residues), see Phobius details amino acids 297 to 317 (21 residues), see Phobius details amino acids 338 to 358 (21 residues), see Phobius details amino acids 364 to 384 (21 residues), see Phobius details amino acids 391 to 410 (20 residues), see Phobius details amino acids 429 to 449 (21 residues), see Phobius details PF00474: SSF" amino acids 33 to 399 (367 residues), 23.9 bits, see alignment E=9e-10

Best Hits

KEGG orthology group: None (inferred from 68% identity to hel:HELO_1521)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PF17 at UniProt or InterPro

Protein Sequence (454 amino acids)

>HP15_2133 solute symporter-like protein (Marinobacter adhaerens HP15)
MFYTTLAAIVVAMILFAWLGLRARLADGGLDDYVTARNSQGARALGLSFLASGMGGWILF
APPEVGALVGPLALAGYALGAALPFIVFAFCGPAIRRFLPEGRSIGEFANACYGNGVRRY
VSTISVLYMLCFLTAELTAIGAITSLLSGIDGGIVVIGVAITTLVYTAVGGLRASIVTDQ
WQALLLIGLLAIVSFVAVGKLPDAAPAALPDIPASAALSVALTLVIAVTAANLFHQGYWQ
RLWSARDTDALSRGALLGGVVTIAVVAVVGGLGILAAMSGADLGSPPIPFFALLADAPAW
LALPALILAITLVASSVDTLQNALASLAVTEKQGLSIVSARWFTVLLMIPVVLVALQGIS
VLRLFLIADLLCATAVLPVLMGLWGKMTTRAAILGCLAGLFGAILPGWITGGSLMAGLEA
ASFPGSIPTLMPFVGALVGSGLVSVVIATTTRKR