Protein Info for Psest_2137 in Pseudomonas stutzeri RCH2

Annotation: Uncharacterized membrane protein, putative virulence factor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 488 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 37 to 60 (24 residues), see Phobius details amino acids 82 to 105 (24 residues), see Phobius details amino acids 117 to 138 (22 residues), see Phobius details amino acids 150 to 170 (21 residues), see Phobius details amino acids 176 to 194 (19 residues), see Phobius details amino acids 215 to 236 (22 residues), see Phobius details amino acids 253 to 275 (23 residues), see Phobius details amino acids 296 to 322 (27 residues), see Phobius details amino acids 335 to 356 (22 residues), see Phobius details amino acids 368 to 388 (21 residues), see Phobius details amino acids 394 to 416 (23 residues), see Phobius details amino acids 425 to 445 (21 residues), see Phobius details amino acids 451 to 472 (22 residues), see Phobius details PF03023: MurJ" amino acids 25 to 442 (418 residues), 172.6 bits, see alignment E=6e-55

Best Hits

KEGG orthology group: None (inferred from 92% identity to psa:PST_2178)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GKZ6 at UniProt or InterPro

Protein Sequence (488 amino acids)

>Psest_2137 Uncharacterized membrane protein, putative virulence factor (Pseudomonas stutzeri RCH2)
MNVSLVILALTVASFLLGFLRDLFIARSFGLSWEADLIFVALILPLFFENFLGLALRDAL
IPYLQKLRSQSQSLFEAVARWLYWRIMLLGGAVCLVILLTSYWVLNALAPGWTPEQVANG
QLVFCVGALLIGVQAALYCQGALLNMDNVFILPMTRTLLLNAGAIIGILLFEPSGMAIFL
GMLLPQLVLIVVQHRRIRYLRGEAQALEKGHGSQFGLAFAPVLLAAGAQQACILAERMFA
SFLEEGSITMLSFAFRIVTIPLTLYAMSVLSVLFPQFSASWNDQDHTGHAAVIRKGLLAT
LLFLVPATVVLCSFPEAVVSVLLERGEFGAAQTQATASLMVIYALGLPAMGLALLWGRAL
LAQHQVRLFLVITLISSAMTIGLDAALYRHYGAAGLALAFSSGAALQAMFMGLFVYRASP
KGAGVAVLARWLATAVVVAAALHFVPQPHGLIELCLYIGLVLAAFAAGVTLLGERDLFRL
RYWSMHKA