Protein Info for Psest_1871 in Pseudomonas stutzeri RCH2

Annotation: Predicted esterase of the alpha-beta hydrolase superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 743 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details PF01734: Patatin" amino acids 43 to 235 (193 residues), 122.7 bits, see alignment E=3.4e-39 PF07244: POTRA" amino acids 348 to 418 (71 residues), 30.1 bits, see alignment E=9.5e-11 PF01103: Omp85" amino acids 464 to 743 (280 residues), 47.9 bits, see alignment E=2.2e-16

Best Hits

KEGG orthology group: K07001, (no description) (inferred from 94% identity to psa:PST_2465)

Predicted SEED Role

"putative patatin-like phospholipase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GKU9 at UniProt or InterPro

Protein Sequence (743 amino acids)

>Psest_1871 Predicted esterase of the alpha-beta hydrolase superfamily (Pseudomonas stutzeri RCH2)
MAAYNSRLSTLPGSAMLRLFVCLLFLLVLPASFAEPSQPKTGLVLSGGAARGLAHVGVLK
ALEEQGVRIDAIAGTSMGAVVGGLYAAGYSVAELERLALTLDWQQVLSDDPPRQDIPYRR
KQDDRDFLIKQKLSFRDDGSLGLPLGVIQGQNLALLLERLLVHASDTRDFDQLPIPFRAV
ATDIANDEKVVFRRGHLPQVIRASMSIPAVFAPVEIDDRLLVDGGMVDNIPMDVAREMGV
DRLIVVDIGTPLKPRKELLTVVDVLNQTTTMMTRRNSEAQLATLQPQDLLIQPPLAAYGS
TDFARAEQLVDAGYRATLALEGRLAEMRATSGGNPALSLARSSDPRTPIITAIRVENDSK
VSDAVIRRHIRQQLGEPLDLEDLQKDMGTLYGLDYFERVEYRVQRGKLGNTLVINAREKR
TGTDYLRLGLSLSDDFRGDSVFNLGASYRKNGINELGAEWLTRLQLGDRQELYSEFYQPL
DAGSRWFVAPNLFVEAQNVEAILDNDPIAEYRLQRYGYGLNLGRQIANNGEIRFGIGQAW
GEADVRIGERDLPDFSFTEGYYELQYSFDTLDNIDFPREGEDIRLTMRQYDPSLSSDQRY
RQWNIKLDKALSHDANTWVLGGRYGRTLDDAEVVTSSFLLGGARQLSGFRQDALAGQNIS
LARMVYYRRVTPRAFQPLDFPLYLGGSLERGRVWNNDNAFDSGYINAASIFLGYDTPLGP
LNFGFGFNDEDERALYMNLGRSF