Protein Info for Psest_1840 in Pseudomonas stutzeri RCH2

Annotation: Undecaprenyl-phosphate glucose phosphotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 475 transmembrane" amino acids 20 to 43 (24 residues), see Phobius details amino acids 50 to 72 (23 residues), see Phobius details amino acids 85 to 108 (24 residues), see Phobius details amino acids 115 to 137 (23 residues), see Phobius details amino acids 286 to 307 (22 residues), see Phobius details TIGR03025: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase" amino acids 38 to 474 (437 residues), 431.7 bits, see alignment E=4.3e-133 TIGR03023: undecaprenyl-phosphate glucose phosphotransferase" amino acids 46 to 475 (430 residues), 482.4 bits, see alignment E=2e-148 PF13727: CoA_binding_3" amino acids 69 to 245 (177 residues), 82.8 bits, see alignment E=3.2e-27 PF02397: Bac_transf" amino acids 281 to 468 (188 residues), 224.7 bits, see alignment E=6.5e-71

Best Hits

KEGG orthology group: None (inferred from 95% identity to psa:PST_2491)

Predicted SEED Role

"capsular polysaccharide biosynthesis protein" in subsystem Rhamnose containing glycans

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GK67 at UniProt or InterPro

Protein Sequence (475 amino acids)

>Psest_1840 Undecaprenyl-phosphate glucose phosphotransferase (Pseudomonas stutzeri RCH2)
MRVQSVGTLEYAHPSFVDYFLASIRLIHGLTAILPGLLLLAFMDLPTSGTFSAFLGFFAV
LSIIIFQTAGIYSEEVFSTLLRFRVMLIAWAAAFSFLIFMHQGMGLFGYLEAKHLAFWFF
TSAALFGAERLAMLALFRRLMARGMFLQNAVILGGTDNGIRVAEYLQNHRDIRTGVLGFI
DDRLERLPKELANLPLLGNTRDLERMIRDEKVTQVLVALPWFADSRIGQVIAELRKLPVN
VLLVPDMVAFRHADKRITEIGGLPTLIASDLPLRGWSPMFKRLEDIVISSIALLAAAPVM
LAIALAIKLDSPGPVLFKQKRYGYNNRLIEVFKFRSMYHEKSDANADRQTTRGDDRITRV
GRFIRKTSLDELPQLLNVFLGSMSMVGPRPHATATKAAGVLFEDAVAEYSSRHRVKPGIT
GWAQINGYRGETDTLEKIEKRVEFDLDYIERWSVWFDLYILVRTPPALIFNKDVY