Protein Info for Psest_1813 in Pseudomonas stutzeri RCH2

Annotation: pseudaminic acid biosynthesis-associated protein PseG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 373 TIGR03590: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase" amino acids 1 to 312 (312 residues), 325 bits, see alignment E=2.5e-101 PF04101: Glyco_tran_28_C" amino acids 233 to 352 (120 residues), 32.5 bits, see alignment E=4.4e-12

Best Hits

KEGG orthology group: None (inferred from 72% identity to psa:PST_3837)

Predicted SEED Role

"Pseudaminic acid cytidylyltransferase (EC 2.7.7.43)" in subsystem Pseudaminic Acid Biosynthesis (EC 2.7.7.43)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.43

Use Curated BLAST to search for 2.7.7.43

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GM01 at UniProt or InterPro

Protein Sequence (373 amino acids)

>Psest_1813 pseudaminic acid biosynthesis-associated protein PseG (Pseudomonas stutzeri RCH2)
MNVVFRADASLQMGTGHVMRCLTLADALTAAGARCEFICRTHPGNLLDLIRSKGYIAHEL
SVRQGMSGAGVSGCKTESGEHASAHSHWLGASQAEDAAACVPILAELQPDWLIVDHYALD
VRWEQALKSHYRRLMVIDDLADRPHACDLLLDQTYGRQDEDYRAWVPDDCQILCGSQYAL
LRPEFAARRPYSLQRRVRPQLRQLLISMGGVDKDNATGRVLDALRDCPLPGDCRITVVMG
STAPWLKEVKQQTLSLPWPSQVLVGVSDMARVMADSDLAIGAAGATSWERCCLGLPTIML
VLADNQRKVAQGLEQGQAARIIERLQDIGSCLPKLLRHLTEHPTALQLMSQSATRIVDGK
GVSTVVHLLETLT