Protein Info for Psest_1788 in Pseudomonas stutzeri RCH2

Annotation: TIGR01244 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 582 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details TIGR01244: TIGR01244 family protein" amino acids 4 to 136 (133 residues), 141.8 bits, see alignment E=6.7e-46 PF04273: BLH_phosphatase" amino acids 4 to 110 (107 residues), 114.2 bits, see alignment E=5.2e-37

Best Hits

KEGG orthology group: None (inferred from 88% identity to psa:PST_2523)

Predicted SEED Role

"FIG003847: Oxidoreductase (flavoprotein)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GLS2 at UniProt or InterPro

Protein Sequence (582 amino acids)

>Psest_1788 TIGR01244 family protein (Pseudomonas stutzeri RCH2)
MQTIKRLTPFISVAAQLQPADMALLAASGFRCVIYNRPDSEDEGQPASAIMRVAAEASGL
EYHHLPVVSGQISDADVAAFRSLLERVKGPALAFCRTGTRSASLWALAEAHHLDPHVLLQ
TAQQANYDLSGLLPRLEQYWQSATDQPLQAAGKLAVTPRYDVLVIGGGAAGCAVTASLFK
RDPDLRIAIIEPRDQHYYQPGWTMVGAGVFDRANTERAMSRCIPAKAQWIRAAAEAFEPE
HQQIVLEDGSRIGYRALVVCPGLSLDWDAIEGARESLGKFGVTSNYAFELAPYTWQLVQS
LRHGKALFTQPPMPIKCAGAPQKAMYLSCDHWLRQGVLKDIQVDFCSAGAVLFGVADFVP
GLMSYVERYGAQLQFNNRLTAIDGPARKASFNVVDSHGNSRTEEREFDLLHVVPPQHAPD
FIRHSALSNADGWFEAEHETLRHPRFGNIFSLGDVCSAPNAKTAAAVRKQAPVVAENVLS
VLGGKGPRAIYDGYGSCPLTVERGKVILAEFGYGGKLLPTFPLDPRVPRRLAWRLKTQWM
PSIYFDMMLKGHEWLAEPKHLDFEPRPADAPDACNFTQEKKA