Protein Info for HP15_1581 in Marinobacter adhaerens HP15

Annotation: protein containing DUF262

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 668 PF03235: DUF262" amino acids 20 to 227 (208 residues), 110.3 bits, see alignment E=1.4e-35 PF07510: DUF1524" amino acids 522 to 651 (130 residues), 65.7 bits, see alignment E=4.2e-22

Best Hits

Predicted SEED Role

"FIG01200742: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PM17 at UniProt or InterPro

Protein Sequence (668 amino acids)

>HP15_1581 protein containing DUF262 (Marinobacter adhaerens HP15)
MTAVAEHQVNTEVLTLKNVSDKEVGFVIPSYQRPYVWRDEDVIKLFDDIREAFVTDEPQY
FIGSVLSAVRVEEGTRIYELIDGQQRTTTLMLLSLAFKAAEVQSELAEASILGDQPRLSF
EIRDAVRNLLGSYAGLERMTRPGPDAIQNDAYLTHLDANLRVLKQQVATLREDNDFDLEA
FADYVYRNVSWVNNIVPESMDLNRLFASMNTAGIQLEPVDLLKAKLFRKITTDKALYRVI
WQACEHMENYFERNLRQLFPNANWNAIEYKDLKAYKGKIIEGKAGETEDIQGEESGKTLL
QLLDEVKAGDEPDNLTPKMEEDTQEGIEDETVYCRSIVGFELLLIHALRVFCVRNQWPDI
EARIKASNLMACFDCLLEKDESTIKQFVELLWQVRYQFDTWVMKWAEHDDQPDPQLRLTN
ISRSQSNGKYYINRSAKDLGSLVQLQAVRNFTGDRSAHYWLTALLAQLVEKPEMDSEQVL
YVLEKLDNQLSLTTETQKEASFKIARGEFPATLGWAYMEAHLNSAKGTSFEHYWFQKLEY
LLWKQGDHSDEKLKRYRITSKNSVEHVHPQNEEYKNAMPKGSLDAFGNLVLLSPGENSSY
SNQTVGKKREDFKDKPRYDSLKLKAIFEVYDDAGGEWGEEQIALHQKRMTALLENHYRHG
GEHGQPNQ