Protein Info for HP15_1426 in Marinobacter adhaerens HP15

Annotation: 6-aminohexanoate-dimer hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 332 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF00144: Beta-lactamase" amino acids 42 to 308 (267 residues), 89.9 bits, see alignment E=9.6e-30

Best Hits

KEGG orthology group: None (inferred from 56% identity to csa:Csal_1128)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PK93 at UniProt or InterPro

Protein Sequence (332 amino acids)

>HP15_1426 6-aminohexanoate-dimer hydrolase (Marinobacter adhaerens HP15)
MQRFSYWLFALLLLVTPPSHSETADWQTEVSREAANLERLHSLIVVHEGQEVLALDLKSA
GLDTPTNIKSLSKTVLAALVGIGIEKGVFEGTNQPVVETLGDRVPASATEGVDRITLGHL
LSLQAGLQRTSGRYYGPWVNSDNWVHHVLTRPFVDEPGGRMLYSTGSSHLLSAALTESAG
RSTLDLAREWLGEPLNITIPAWGRDPQGIYFGGNNMALSPRDLAKIGELYRNEGRLGDRR
LFPENWVRESWIERGRSAYTDDPYGYGWFQQPLAGEMGYYGRGYGGQVLYVMPARKLTVV
MTSDPTPPSPGSAFLRRQFQLIEEHIIPAVEN