Protein Info for Psest_1357 in Pseudomonas stutzeri RCH2

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 230 PF03473: MOSC" amino acids 49 to 163 (115 residues), 133.1 bits, see alignment E=5.3e-43 PF03475: YiiM_3-alpha" amino acids 173 to 213 (41 residues), 49 bits, see alignment 4.4e-17

Best Hits

KEGG orthology group: None (inferred from 83% identity to psa:PST_2936)

Predicted SEED Role

"Uncharacterized protein conserved in bacteria"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GKR3 at UniProt or InterPro

Protein Sequence (230 amino acids)

>Psest_1357 Uncharacterized protein conserved in bacteria (Pseudomonas stutzeri RCH2)
MQLARIEQLLVGNAVAYTRPGSRSAIAKQPVEGAVAVGVEGLAGDEQGDRRVHGGPYKAV
HHYPFEHYRNWREQLGDSPLLQQPGAFGENISTRGLVEADLCLGDVLRCGDALLQVAQSR
QPCWKLNDRFGVADMSLRVQQSGMTGWYYQVLQPGQLQVGQALVLEQRPFPRWPLTRVMD
VLYRRTLERDALLELAELPLVPNWRTLVERRLQANTVEDWNKRLYGATDA