Protein Info for HP15_1236 in Marinobacter adhaerens HP15

Annotation: conserved hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 709 PF03993: DUF349" amino acids 456 to 531 (76 residues), 60.4 bits, see alignment E=8.8e-21 amino acids 536 to 598 (63 residues), 29.8 bits, see alignment E=3.1e-11

Best Hits

Predicted SEED Role

"FIG00785054: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PHN5 at UniProt or InterPro

Protein Sequence (709 amino acids)

>HP15_1236 conserved hypothetical protein (Marinobacter adhaerens HP15)
MAAFIQKLFKSRKTTEATPKQRKATQPEPVEQEDTRTDRREEQLKTLESAPSQDVLAKLA
IDGVTADIRQSAAGRLTDEASLQEVQKQAKGRDKGVYQIVKLALQRRREEQARLDSISQT
IATLTRHAQDQAKSDDTKLYEARLDALLKQWTEVETHASPEQAQAFLEAVHLCKERIAAL
QSAAEDEKRQREQKLQRQETLDLLTRTLDELKSQPPETLPSLASLDALQKTQENRWLEAT
RDTAVEKQEQKAYENAMLALRNYLSSVRRITQERETIVELGALLERADDATDEQRAQAKT
LVAEINWPEGYPIPALLEPLRKLAGKRKKPAEPRVDQEQQKALTTRLEAEIRQLEEALEA
KQLKESKQLFKTAQQHFRDLDQRHAKPYQARMQLLTGQLRELSDWQGFATEPKQIALCEQ
MEYLAEQPMDPEAKAERIKELQNEWRDLGGSSDRSLWSRFKAASDKAYEPCKAYFSAKSG
LKQANLEKRSAICEQLESFLDNADWSSIDWKAAERIHQTARQEWKEAWPVEFRDNRAVQK
RFDELLKRLEAPLDEERRKNEGLKQTIVEKAQALVEHEPLQEAMNQAKALQGDWQAIGIT
RHREDRKLWQAFRKACDQIFARRDAERSEQQQASRAADETAQAGLNQVSGISPESDEQAV
TAALATLKDIDAATLSKGVREQVQQEKQRLSKILSALRLQAKWLPGSLW