Protein Info for HP15_1205 in Marinobacter adhaerens HP15

Annotation: FOG: ankyrin repeat protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 916 PF12796: Ank_2" amino acids 746 to 826 (81 residues), 32.9 bits, see alignment E=1.9e-11 amino acids 769 to 851 (83 residues), 44.3 bits, see alignment E=5.5e-15 PF13857: Ank_5" amino acids 750 to 803 (54 residues), 32.9 bits, see alignment 1.6e-11 PF00023: Ank" amino acids 765 to 795 (31 residues), 21.6 bits, see alignment (E = 5.1e-08) PF13606: Ank_3" amino acids 765 to 792 (28 residues), 17.2 bits, see alignment (E = 1.4e-06)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PHK4 at UniProt or InterPro

Protein Sequence (916 amino acids)

>HP15_1205 FOG: ankyrin repeat protein (Marinobacter adhaerens HP15)
MCRSVTKEKSMATFPTIETALLEIHQSLGLKQGQSDTKRKFSSGHMQLINHQKMGEQVLW
EIFDELELDEQARAGFVDDLVKIGNAYKGLECNTWTFNADLRQVFWLVLGHFFTPGIARH
AAFWNLGANLDGGMPRGSFWYLPEVLSDKNETGVYLPVSQVVDWLSDLAGGSIERLAECR
NRAASVSEVDDTETFIRTLYNWRKGTLPYRDKIHCFFSDDFEINFAGSFELDTTETFDRQ
FSDALRFVEAKKLDEQALRKELAIGDEQDIKRIISGHGTANEKQLFIGLVADRYQRPTLK
IIRQRLLFARMIQDGYERALKFLCPGVEKSCPNFEQNKLLQVFAIYKHIYNLTIAAWRNC
RVDGEVAEDEWFEERLDPWDAYTLYLSILPSRHETAILELASLLNRMFGSMIAEADLQDL
IGYNASSREHVTKAKLGLVTSHAEETIAISKLIDRLKTASPWRTLQSEGRYSVVTQVAGA
SGLSPKARSAAIERLKELAETPGEQLPPILLELDGYLNGDRKKLSKDSAIQVEKLLAKAK
ANPSFDQWEAPFLQYEAKHHLAKNDFKLAQKLFDAARKAVLGRGFGSLRGEIARDGFAVQ
VADQKLIPNNHEIYYREMLAGGVIEEEKAPGIEEVAKWASEYFWNDLYKPYPGLERKKPV
GSEELKPAINVFMSGDVNAIKDWINLNHKKYNKSLHYVTGDSLLLSWIKCRSHFQNQLPK
MKQIAPMDLQPELQRMERNFDVWRQAIKLLAQKGPKQLTLTDFKGQSPLMLVAEAGDSEL
VQAFLEAGADPDLQDFQGKSAFHAAVKSYDKASIDALLSHRCNLSLKTVDGRSALHTATW
SGNTYAIKKVIELSPQLAWQRDSNGMTPLELAKFYCETPGALSYLNAELVKEGRKPVPAE
QIEKLITALKNAPAVN