Protein Info for HP15_1197 in Marinobacter adhaerens HP15

Annotation: conserved hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 320 TIGR03299: phage/plasmid-like protein TIGR03299" amino acids 6 to 316 (311 residues), 376.5 bits, see alignment E=5.1e-117 PF06067: DUF932" amino acids 77 to 300 (224 residues), 229.4 bits, see alignment E=2.5e-72

Best Hits

KEGG orthology group: None (inferred from 68% identity to har:HEAR1849)

Predicted SEED Role

"Mycobacteriophage Barnyard protein gp56"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PHJ6 at UniProt or InterPro

Protein Sequence (320 amino acids)

>HP15_1197 conserved hypothetical protein (Marinobacter adhaerens HP15)
MAHLIEQMSYAGQTPWHGLGNELTSDQPLDVWARQAGLDWQIQESPVRYIANASGTLGEI
LSFPDSKVLYRSDTKAPLSVVGNRFKVVQPEEILEFYRDLTEVSGFELETAGVLKGGRKM
WALARTGQSGMLRGNDQTNAYVLLATACDGTMATTCQFTSIRVVCNNTLAVALKSSTANA
VKVKHNTAFDADLVKKQLGISVSAWDDFMYSLKTLSERNVKTTEARNYFLKVFTDDSGIG
VGKTNERSMVKALGLYEGEGMGANLASSEGTAYGLLNAVTEFIDHQRRAKTVDHRLDSAW
FGTGAAMKSRALEQAMSLVA