Protein Info for HP15_1040 in Marinobacter adhaerens HP15

Annotation: conserved hypothetical protein, membrane

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 456 transmembrane" amino acids 31 to 51 (21 residues), see Phobius details amino acids 63 to 88 (26 residues), see Phobius details amino acids 108 to 129 (22 residues), see Phobius details amino acids 143 to 160 (18 residues), see Phobius details amino acids 170 to 192 (23 residues), see Phobius details amino acids 202 to 221 (20 residues), see Phobius details amino acids 256 to 278 (23 residues), see Phobius details amino acids 346 to 368 (23 residues), see Phobius details amino acids 374 to 395 (22 residues), see Phobius details amino acids 407 to 433 (27 residues), see Phobius details PF00860: Xan_ur_permease" amino acids 38 to 284 (247 residues), 31.8 bits, see alignment E=3.2e-12

Best Hits

KEGG orthology group: None (inferred from 95% identity to maq:Maqu_2092)

Predicted SEED Role

"FIG00784312: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PG62 at UniProt or InterPro

Protein Sequence (456 amino acids)

>HP15_1040 conserved hypothetical protein, membrane (Marinobacter adhaerens HP15)
MFHRKNGEEQPFWPAGPFKVRLPFVHYRWEFAEMVQALIMFVVSLAMIPLLEKYLGVPYD
VALAYVVICGIGFMLPALLGVPLVPGWITPGIPVVLLFLSDYEPGPEAIQALFALQFLVF
IIFLVLGITRLGSKLVELIPRSMKGGIIIGAGIAALMGEIEAGGRLANTPISLIIGGLVC
LYLMFSVSFKGFVESNSIARKIANYGMVPGMVVAILVGFATGEYEVPNVEWGITKPAFDE
LWNYLPFAVGFPDANVFLYAIPTAVIAYVIAFGDIVVGQSLMNRVDHLRKDEDIDNSIDR
VHLVTAIRNGGHAFFAPYPGLAGPIWTAVTATMAERYKYGRNAMDSIYSGGGTFWITGFI
ALFVLPLVSFFQPVLPIALSLTLLLTGYICLMVGLEQLENNTERGIAGTMGVVLAVYGAG
WGLATGAVLYFLIERTKLLGFTADPEAPGVKAAEEH