Protein Info for HP15_1033 in Marinobacter adhaerens HP15

Annotation: flavoprotein, NADB Rossmann superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 393 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 23 to 23 (1 residues), see Phobius details PF07992: Pyr_redox_2" amino acids 5 to 164 (160 residues), 27.3 bits, see alignment E=1e-09 PF03486: HI0933_like" amino acids 5 to 391 (387 residues), 460.2 bits, see alignment E=2.3e-141 PF00890: FAD_binding_2" amino acids 6 to 86 (81 residues), 38.1 bits, see alignment E=4.5e-13 TIGR00275: flavoprotein, HI0933 family" amino acids 7 to 390 (384 residues), 393.1 bits, see alignment E=6.8e-122 PF13450: NAD_binding_8" amino acids 9 to 40 (32 residues), 26.1 bits, see alignment (E = 3.4e-09)

Best Hits

KEGG orthology group: K07007, (no description) (inferred from 81% identity to maq:Maqu_2099)

Predicted SEED Role

"NAD(FAD)-utilizing dehydrogenases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PG55 at UniProt or InterPro

Protein Sequence (393 amino acids)

>HP15_1033 flavoprotein, NADB Rossmann superfamily (Marinobacter adhaerens HP15)
MPSHYDVIIIGAGAAGLMCAATAGYRGRSVLVLDHANKPGKKILMSGGGRCNFTNLNSTP
ANLLSDNPHYCISALKRYTPQDFLELVDRHGIEHEEKAPGQLFCKDSAKDILNMLLTECE
WAGANVRMKTAVDRITETDSGYRLRVGSGDLTCESLVIATGGLSIPTMGATAFGYRVAEQ
FGLEILPTRAGLVPFTLQPELKEQLAPLSGVSCPVDVQCHDQHFREPMLVTHRGLSGPAM
LQISSFWEPGDSLAINLLPACQIKDDLLNLRKTRPQSTVGHYLAQHLPKRFAQAFNELHG
WTGPLQGYKNSDIEQVADVLGQWSIKPAGTEGYRTAEVTLGGVDTRQLSSKTMAVLERPN
LYFIGEVVDVTGHLGGHNFQWAWASGVAAGSSA