Protein Info for EX31_RS21145 in Rahnella sp. WP5

Annotation: oxalurate catabolism protein HpxZ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 127 PF11533: AtzH-like" amino acids 5 to 126 (122 residues), 207.8 bits, see alignment E=5.6e-66 PF13474: SnoaL_3" amino acids 16 to 126 (111 residues), 28.8 bits, see alignment E=2e-10 PF14534: DUF4440" amino acids 17 to 118 (102 residues), 33.7 bits, see alignment E=6.6e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to rah:Rahaq_0928)

Predicted SEED Role

"FIG00441296: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (127 amino acids)

>EX31_RS21145 oxalurate catabolism protein HpxZ (Rahnella sp. WP5)
MKTEHIDRPAILAEMNAAFYRYEQALITNDTAVLDELFWHDPRTVRYGAGENLYGIDAIR
AFRTARSSQGLDRELVNTTITTFGDDMAVASTEFRREGSDKIGRQQQTWVKMASGWKIVA
AHVSLMV