Protein Info for EX31_RS19110 in Rahnella sp. WP5

Annotation: GTP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02492: cobW
  • amino acids 5 to 171 (167 residues), 153.1 bits, E=6.4e-49

Best Hits

Swiss-Prot: 70% identical to YEIR_ECOLI: Zinc-binding GTPase YeiR (yeiR) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 99% identity to rah:Rahaq_1327)

MetaCyc: 70% identical to zinc-binding GTPase YeiR (Escherichia coli K-12 substr. MG1655)
3.6.1.15,3.6.5.6,3.6.5.5,3.6.5.4,3.6.5.3,3.6.5.2,3.6.5.1,3.6.1.-,3.6.1.5 [EC: 3.6.1.15, 3.6.1.5, 3.6.5.1, 3.6.5.2, 3.6.5.3, 3.6.5.4, 3.6.5.5, 3.6.5.6]

Predicted SEED Role

"Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family"

MetaCyc Pathways

• superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (18/18 steps found)
• superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) (14/14 steps found)
• pyrimidine deoxyribonucleotides de novo biosynthesis I (9/9 steps found)
• pyrimidine deoxyribonucleotides de novo biosynthesis III (8/9 steps found)
• pyrimidine deoxyribonucleotides de novo biosynthesis IV (6/7 steps found)
• pyrimidine deoxyribonucleotides biosynthesis from CTP (6/8 steps found)
• UTP and CTP dephosphorylation I (5/7 steps found)
• UTP and CTP dephosphorylation II (1/3 steps found)

KEGG Metabolic Maps

• Purine metabolism
• Pyrimidine metabolism
• Thiamine metabolism

Isozymes

Compare fitness of predicted isozymes for: 3.6.1.15

Use Curated BLAST to search for 3.6.1.15 or 3.6.1.5 or 3.6.5.1 or 3.6.5.2 or 3.6.5.3 or 3.6.5.4 or 3.6.5.5 or 3.6.5.6

Protein Sequence (324 amino acids)

>EX31_RS19110 GTP-binding protein (Rahnella sp. WP5)
MTKTNLITGFLGSGKTTTLRHLLAQKPEGEKWAVLVNEFGEVGIDGALLADSGAVLKEIP
GGCMCCVNGLPMQVGLNMLLQQAKPDRLLIEPTGLGHPKQILSLLTSDVYSNWLTLNATL
CLLDPRQLSDQRVTDNENFRDQLAAADIIVANKSDVTQAQDTQKLDEWYQQNGHERLLVT
ASQGEIDLTLLDFPRQNLVELPQGKHHHAHAAKQGLAALSLPGKQRWRRALNQADGYTSC
GWIFDGETQFETAGILDWARAVPVDRVKGVIRIKEGTLLINRQGNDLHIETKPVAPLDSR
IELITQNEVQWNAIQSSLLKIRLS