Protein Info for EX31_RS19055 in Rahnella sp. WP5

Annotation: YeiH family putative sulfate export transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 368 transmembrane" amino acids 24 to 45 (22 residues), see Phobius details amino acids 51 to 72 (22 residues), see Phobius details amino acids 92 to 110 (19 residues), see Phobius details amino acids 116 to 134 (19 residues), see Phobius details amino acids 146 to 163 (18 residues), see Phobius details amino acids 175 to 196 (22 residues), see Phobius details amino acids 203 to 221 (19 residues), see Phobius details amino acids 241 to 261 (21 residues), see Phobius details amino acids 281 to 300 (20 residues), see Phobius details amino acids 306 to 329 (24 residues), see Phobius details amino acids 341 to 362 (22 residues), see Phobius details TIGR00698: conserved hypothetical protein" amino acids 28 to 365 (338 residues), 423.7 bits, see alignment E=2.8e-131 PF03601: Cons_hypoth698" amino acids 30 to 345 (316 residues), 364.1 bits, see alignment E=2.4e-113

Best Hits

Swiss-Prot: 67% identical to Y1307_YERPE: UPF0324 membrane protein YPO1307/y2878/YP_1285 (YPO1307) from Yersinia pestis

KEGG orthology group: None (inferred from 99% identity to rah:Rahaq_1339)

Predicted SEED Role

"Putative membrane protein YeiH" in subsystem YeiH

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (368 amino acids)

>EX31_RS19055 YeiH family putative sulfate export transporter (Rahnella sp. WP5)
MSTLALKNENKKTADKHPLPRLSGFGRVLPGLALTGVITALALWLSDIPALSHLGLSALT
LAIVIGMVVGNTVYPAAKPWCEDGVTLAKQRLLRLGIILYGLRLTFAQIADVGATGIVID
ALMLCSTFALACWLGQRVFKLDRDTAMLIGAGSSICGAAAVMATEPVLNAKAEKVTVAVA
TVVIFGTAAIFLYPWLWHLNAQYHWLSFTAAQFGIYTGSTVHEVAQVVAAGQGVSPDAEN
AAVIAKMIRVMMLAPFLLLLSGWKSRKEVQQGGQNAGMRNITIPWFALLFILVAAFNSLN
ILPHSWIPALITLDTVLLAMAMAALGLTTHMSALRQAGLKPMLLAALLFIWLIVGGAGIN
QLVQHLFG