Protein Info for EX31_RS11180 in Rahnella sp. WP5

Annotation: acyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 404 transmembrane" amino acids 42 to 59 (18 residues), see Phobius details amino acids 75 to 100 (26 residues), see Phobius details amino acids 121 to 141 (21 residues), see Phobius details amino acids 168 to 185 (18 residues), see Phobius details amino acids 197 to 218 (22 residues), see Phobius details amino acids 238 to 258 (21 residues), see Phobius details amino acids 265 to 285 (21 residues), see Phobius details amino acids 291 to 309 (19 residues), see Phobius details amino acids 325 to 346 (22 residues), see Phobius details amino acids 358 to 379 (22 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 40 to 372 (333 residues), 94.2 bits, see alignment E=4.2e-31

Best Hits

KEGG orthology group: None (inferred from 99% identity to rah:Rahaq_1871)

Predicted SEED Role

"Acyltransferase 3"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (404 amino acids)

>EX31_RS11180 acyltransferase (Rahnella sp. WP5)
MNPAINREISIDAIHADAIEMAGSQPITTGKLPPQIKLPSLTGSRFWAALLVFLFHSSLP
SDLAPFSDPTIQHIFTVIVGKAGWLGVSYFFILSGFIMVWSARDNDTVGDFYLRRFAKIY
PTHCLTWAIAFIIGAMSIYQYKIWSSNLLLLNTWVDDVHYFFVGNRPSWSLCIEAMFYLS
FPFLFRVIKTIPEKFDLAGLIIVTAASLLVQTYIYLWVEPDKMMGAFPISQQHFWVSYIF
PPSRIFEFLAGMFAARLLMNGRMLVLTKTASFTLLAATYIGSMYIPYQFSMSVVFIIPVC
LLIVSIAGDDLKYRNTLLNSKTSVWLGEISYSFYMVHFLVLFYFLNLTAGRKFSLPEGIA
LIAVALVLSVSFASFLYKYFEVPVMKLILEKCRAKALVALRKPS