Protein Info for EX31_RS10905 in Rahnella sp. WP5

Annotation: DUF2264 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 612 PF10022: DUF2264" amino acids 14 to 355 (342 residues), 407.3 bits, see alignment E=5.7e-126 PF20938: DUF2264_C" amino acids 363 to 581 (219 residues), 155.6 bits, see alignment E=1.7e-49

Best Hits

KEGG orthology group: None (inferred from 99% identity to rah:Rahaq_1934)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (612 amino acids)

>EX31_RS10905 DUF2264 domain-containing protein (Rahnella sp. WP5)
MTPKKVNINNPLQTRDDVQHLLKELLAAVSPYTEEGKSGISLGNSTTHYGKEIAKMEALS
RMLWGIFPLLAGGGECEDLPFYLNAIRFGTDPQHPQYWGKIRDFDQRCVEMAAFGVGLTL
LNKQLLQHFSAQEQQNLADWLNQGRDATIPNNNWNFFPVMVQMGFKVSGLPWDQEAVAAR
FALMEEYYLGDGWYSDGPGRPRDYYISMAFHYYGLLYAQNMADVDAPRAAMLRERAQRFA
QDFITMFSAGGAAVPFGRSLAYRFAEAAFWSAAAYSKLEVFSPGIIKGLILRHLRHWLKE
PIFDRDGVLSIGYHTPNLVMAEDYNAPGSPYWACKLFLVLALPPDDAFWQAEEAPLPALP
AAYCIPHASQILTRDAEGQHVVMLTSGQLELNNFVNTEAKYTKFAYSSQFGFTLDRGRYG
LNHAGCDSMLMFSESDGYFRGRRDCEETRITGEMIYSRWLPWHDVAVRTWLIPCGDWHLR
VHHIENQRPLETAEGGFAVMQEPSTQTQLSAEKRGVTITARNGVSRIVALEESEPREASA
VITPPNSSIMFAETAAIPVLKSSLPAGSHWLICAVCASATRDINALAGPEVSRQGQQLRW
QYQGNSGHITLV