Protein Info for EX31_RS08305 in Rahnella sp. WP5

Annotation: maltose ABC transporter permease MalG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 296 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details transmembrane" amino acids 86 to 110 (25 residues), see Phobius details amino acids 122 to 144 (23 residues), see Phobius details amino acids 154 to 175 (22 residues), see Phobius details amino acids 205 to 228 (24 residues), see Phobius details amino acids 259 to 281 (23 residues), see Phobius details PF00528: BPD_transp_1" amino acids 108 to 286 (179 residues), 59.2 bits, see alignment E=2.3e-20

Best Hits

Swiss-Prot: 90% identical to MALG_YERPE: Maltose/maltodextrin transport system permease protein MalG (malG) from Yersinia pestis

KEGG orthology group: K10110, maltose/maltodextrin transport system permease protein (inferred from 100% identity to rah:Rahaq_0537)

MetaCyc: 86% identical to maltose ABC transporter membrane subunit MalG (Escherichia coli K-12 substr. MG1655)
ABC-16-RXN [EC: 7.5.2.1]; 7.5.2.1 [EC: 7.5.2.1]; 7.5.2.1 [EC: 7.5.2.1]

Predicted SEED Role

"Maltose/maltodextrin ABC transporter, permease protein MalG" in subsystem Maltose and Maltodextrin Utilization

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.5.2.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (296 amino acids)

>EX31_RS08305 maltose ABC transporter permease MalG (Rahnella sp. WP5)
MPMVKPKSQKVRLLVTHLLLLCFLALILFPLLMVFAISLRPGNFATGSLIPDQVSWDHWK
LALGIAVNNSDGSVTPPPFPVMLWLWNSIKIAVITAVGIVALSTTCAYAFARMKFRGKSS
LLKGMLIFQMFPAVLSLVALYALFDRLGMYVPFLGLNTHGGVIFAYMGGIALHVWTIKGY
FETIDGSLEEAAALDGASPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV
NSYTLAVGMQQYLNPQNYLWGDFAAAAILSAIPITAVFLIAQRWLVGGLTAGGVKG