Protein Info for EX31_RS06675 in Rahnella sp. WP5

Annotation: cellulose biosynthesis protein BcsG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 548 transmembrane" amino acids 31 to 57 (27 residues), see Phobius details amino acids 68 to 86 (19 residues), see Phobius details amino acids 112 to 131 (20 residues), see Phobius details amino acids 138 to 159 (22 residues), see Phobius details TIGR03368: cellulose synthase operon protein YhjU" amino acids 21 to 546 (526 residues), 711.3 bits, see alignment E=3.1e-218 PF11658: CBP_BcsG" amino acids 23 to 543 (521 residues), 718.4 bits, see alignment E=2.4e-220

Best Hits

KEGG orthology group: None (inferred from 100% identity to rah:Rahaq_2147)

Predicted SEED Role

"FIG002337: predicted inner membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (548 amino acids)

>EX31_RS06675 cellulose biosynthesis protein BcsG (Rahnella sp. WP5)
MNESQSSSPRLRIWQSWRGLGAWNYYFLLKFVLLSQGYLNFDALSNVVFAAVLLFPLRSL
RLHRWRQWIALPFGLALLYHDTWLPGWRSIVNQGADVAGFSFSYLLELADRFINWQWIAI
GFALLVGYLFISQWIRLTTFTVIALLWLNLSGLITPFFAHSPPPAIAQNAVTTPVTVAPS
ATDNTVNGPPTNANLNAYLEQFYQNERRKATKFPDALPADAQPFDLLVINICSLAWSDLD
AVNLSNSPLWSRFDFVFSNFNSATAYSGPASIRLLRASCGQTSHHDLYQPAGQQCYLFDD
LARLGFTPQLAMDHTGVFGNYIGNLRDDADMKVPLMSQAGLGYELTSFDGSPIFNDGQLF
SRWLENQEKAGTARTATFFNLIPLHDGNRYVGSNKGADYHNRAQTLLNQLNIFMDQLDKS
GRKVMLVVVPEHGAALVGDKMQISGLRDIPSPGITHIPVGVKFFGMQAPHAPSPMKIDGQ
SSYQAISEMVARAVDGKVFTSPTMDWKTFGSNLPQTPLVSENENSVVMEYQGKIYIRLNG
GGWVPYPS