Protein Info for EX31_RS05300 in Rahnella sp. WP5

Annotation: isocitrate lyase/phosphoenolpyruvate mutase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 PF13714: PEP_mutase" amino acids 10 to 247 (238 residues), 241.8 bits, see alignment E=4.2e-76

Best Hits

KEGG orthology group: None (inferred from 99% identity to rah:Rahaq_0144)

Predicted SEED Role

"Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)" (EC 2.7.8.23)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.8.23

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (250 amino acids)

>EX31_RS05300 isocitrate lyase/phosphoenolpyruvate mutase family protein (Rahnella sp. WP5)
MNQQSRALAFSQLHQKHNPVILYNIWDAGSALAVAQSGAKAIATGSWSCAAAQGYQDGEA
MPFSSLLRTVQRIASVISLPLTVDFETGYGADRRDNLSALLQAGVVGINVEDQQMGLSAL
NGVREQCEILNSLRQVAETQGMALFINARTDVFLQEPDATRHPVLMAEAKKRLTAYKDAG
ASGFFAPGLSDLTLIAELCEVSALPVNIMASSLTPPLAELTAAGVSRISYGPHPYIGLME
TLKQHAAVLY