Protein Info for EX31_RS04290 in Rahnella sp. WP5

Annotation: N-6 DNA methylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 686 PF02384: N6_Mtase" amino acids 305 to 630 (326 residues), 98.1 bits, see alignment E=6.2e-32

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (686 amino acids)

>EX31_RS04290 N-6 DNA methylase (Rahnella sp. WP5)
MSEELIQLSPKSLGRYLYYRVGSSTLSQLKKNKVIKTKVNANIATKKPDGLVVLAGGDVK
AVIEYKQPSELRTNALIDKAINQEIEVAKNLCKLLIVTCGSKTIWINALNGERICDENGH
ELKKLFDVKHIEDGSLTNEQQLDFEKLIDKIDYSLTEENNNISVPEVLDPSQLAKTLWQK
IWINTGKEPERCLYNVVELFVFKFLSDVGVLKKHLNFTSVYNLSQTESPAEALKHYANTC
RKEIRELFPKGNDGTTVINGTIFVNEKGEPNTAQSSLFGEVLKDLQDYDSKFGSFKYIRR
EFKTRLYESFLRQNAGVRSLGQYFTPRNVVRAIVSMSDSSKLKKGARVCDPFCGVGGFLL
ELIAENKNIWNEFEPKNGLVNPSIDIIGYDKGSDEKEDERTIILAKANMLIYFSDLLVKY
HTPNYLKAFSEGAFNKVFHLLRSNLGTFGKVDDEPYDLILTNPPYVTSGSSSLKRSIDEE
GLAKYYTSSGRGTESLAMEWIVRNLKLDGQAIVVVPDGLLNQESMLGYLKTNCFIEAVVS
LPTRTFYSTPKKTYIICLRKKSDINEEQTNPVFSYLVSEIGETRDAKRWVTDENDLDELV
NLFNQFKGSPNHFTSDNNRCKVIKFEEFGQKNNWMIERWWSKDERVALGVTSEANEITQA
ELVEKVKSISYLINEFIATVEEDSGE