Protein Info for EX31_RS02940 in Rahnella sp. WP5

Annotation: undecaprenyl-phosphate galactose phosphotransferase WbaP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 476 transmembrane" amino acids 12 to 36 (25 residues), see Phobius details amino acids 48 to 67 (20 residues), see Phobius details amino acids 87 to 105 (19 residues), see Phobius details amino acids 111 to 130 (20 residues), see Phobius details amino acids 282 to 304 (23 residues), see Phobius details TIGR03022: undecaprenyl-phosphate galactose phosphotransferase WbaP" amino acids 14 to 476 (463 residues), 531.3 bits, see alignment E=2.7e-163 TIGR03025: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase" amino acids 17 to 476 (460 residues), 390.8 bits, see alignment E=1.1e-120 PF13727: CoA_binding_3" amino acids 83 to 194 (112 residues), 28.1 bits, see alignment E=2e-10 PF02397: Bac_transf" amino acids 280 to 470 (191 residues), 220.8 bits, see alignment E=9.8e-70

Best Hits

KEGG orthology group: K00996, undecaprenyl-phosphate galactose phosphotransferase [EC: 2.7.8.6] (inferred from 100% identity to rah:Rahaq_3599)

Predicted SEED Role

"Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6)" (EC 2.7.8.6)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.8.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (476 amino acids)

>EX31_RS02940 undecaprenyl-phosphate galactose phosphotransferase WbaP (Rahnella sp. WP5)
MTFLTRNFYSSLFLALSDFVSFTLSIYVAKILLSFMLKEFDDYIPAQHVTALVLLHWTLA
FCCVGWFSMRLRHYYYRKTFWFELKEILRTLVIFAVIEIAVMAFAEWNFSRYMWILTWLL
VLIFVPCARMMTKRVLTVLGIWQRDAIIIGTGKNAHEAYKAIQSEKNLGLNVTGFISSEL
TDKPGDSIDGIPIIFCDDLWLLTPCDKKTQFIVAVEAHQSDIRNYWLRVFMIHGYRYVSV
IPTLRGMPLDSTDMSFIFSHEVMILRVHQNLAKWSSRFLKRAFDIVASLGIIAILSPLLL
YISFKVRKDGGPAIYGHERIGKGGRPFKCLKFRSMVINSKEVLEELLANNPEARAEWDET
FKLKNDPRITRIGHLLRKTSMDELPQLFNVLKGEMSLVGPRPIINAELERYSDEVDYYLL
SKPGMTGLWQVSGRSDVDYETRVYLDAWYVKNWSMWNDIAILFKTVSVVLRKDGAY