Protein Info for EX31_RS02800 in Rahnella sp. WP5

Annotation: UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 357 transmembrane" amino acids 6 to 23 (18 residues), see Phobius details amino acids 43 to 63 (21 residues), see Phobius details amino acids 68 to 85 (18 residues), see Phobius details amino acids 93 to 113 (21 residues), see Phobius details amino acids 125 to 146 (22 residues), see Phobius details amino acids 155 to 174 (20 residues), see Phobius details amino acids 180 to 198 (19 residues), see Phobius details amino acids 206 to 227 (22 residues), see Phobius details amino acids 238 to 259 (22 residues), see Phobius details amino acids 287 to 307 (21 residues), see Phobius details amino acids 313 to 332 (20 residues), see Phobius details TIGR02380: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase" amino acids 5 to 329 (325 residues), 347.3 bits, see alignment E=4.8e-108 PF00953: Glycos_transf_4" amino acids 71 to 225 (155 residues), 108.1 bits, see alignment E=2.4e-35

Best Hits

Swiss-Prot: 46% identical to WECA_YERPE: Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (wecA) from Yersinia pestis

KEGG orthology group: None (inferred from 97% identity to rah:Rahaq_3569)

Predicted SEED Role

"Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)" in subsystem Methicillin resistance in Staphylococci or Teichoic and lipoteichoic acids biosynthesis (EC 2.7.8.-)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.8.-

Use Curated BLAST to search for 2.7.8.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (357 amino acids)

>EX31_RS02800 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase (Rahnella sp. WP5)
MYGFLFVTPIICFIFLLAARAVSIKLKLVDKPDYRKKHSSNIPLVGGIAIYLTVVVMNLL
FFPFVTHNNAFLMSSFLLVCIGVLDDRYALSVFLRVIVQAAGAIIIMSDGVYISSFGNLW
NNYELRLGILSFPVSLLAVWASVNAFNMIDGIDGLLGGLSILSFTGLAICFAVAGKMPMA
LYCQLFIAAIVPFIFLNVSCSRLKVFMGDAGSTFLGFTVIWAIMLATGEYNAVMAPATAI
WLIAVPLMDLVAVMFGRLIRRHSPFQPDRTHLHHLLINYGFSNKKTLSIILLGSFLMNAF
GIGLNILKVNELLSLFLFCLIFVTYCFVRHWLVIHTKYSEVSPGDENDNKTIEMSVQ