Protein Info for EX31_RS01320 in Rahnella sp. WP5

Annotation: magnesium-translocating P-type ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 904 transmembrane" amino acids 83 to 102 (20 residues), see Phobius details amino acids 113 to 131 (19 residues), see Phobius details amino acids 291 to 312 (22 residues), see Phobius details amino acids 320 to 345 (26 residues), see Phobius details amino acids 706 to 749 (44 residues), see Phobius details amino acids 773 to 796 (24 residues), see Phobius details amino acids 808 to 826 (19 residues), see Phobius details amino acids 838 to 858 (21 residues), see Phobius details amino acids 874 to 892 (19 residues), see Phobius details TIGR01524: magnesium-translocating P-type ATPase" amino acids 18 to 903 (886 residues), 1410.1 bits, see alignment E=0 PF00690: Cation_ATPase_N" amino acids 34 to 95 (62 residues), 51.3 bits, see alignment 1.9e-17 PF00122: E1-E2_ATPase" amino acids 148 to 354 (207 residues), 137.1 bits, see alignment E=1.2e-43 TIGR01494: HAD ATPase, P-type, family IC" amino acids 267 to 412 (146 residues), 75.1 bits, see alignment E=3.9e-25 amino acids 615 to 733 (119 residues), 95.5 bits, see alignment E=2.6e-31 PF00702: Hydrolase" amino acids 371 to 658 (288 residues), 50.5 bits, see alignment E=8.6e-17 PF13246: Cation_ATPase" amino acids 439 to 484 (46 residues), 24.7 bits, see alignment 4.8e-09 PF00689: Cation_ATPase_C" amino acids 727 to 893 (167 residues), 76.9 bits, see alignment E=4.3e-25

Best Hits

KEGG orthology group: K01531, Mg2+-importing ATPase [EC: 3.6.3.2] (inferred from 72% identity to azc:AZC_0192)

Predicted SEED Role

"Mg(2+) transport ATPase, P-type (EC 3.6.3.2)" (EC 3.6.3.2)

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.2

Use Curated BLAST to search for 3.6.3.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (904 amino acids)

>EX31_RS01320 magnesium-translocating P-type ATPase (Rahnella sp. WP5)
MTVQNNNTLERKTAERKKQALSMRAAQEAKNGIDVTLINVNASRAGLTHGEAAKRLEKEG
YNEVAHDRPPHALVQLIKAFNNPFIYVLAVLAIISFFTDYWLPLRAGEETDLVSVYIICA
MVGLSGLVRFWQEYRSAKSAEALKAMVRTTATVLRRDMPGRQGKLCEIPMRQLVVGDIVQ
LYAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTMGDVAPKSASALNEENENLLDI
PNICFMGTNVVSGTAQAVVVATGARTYFGSLAKAIVGTRAQTAFDRGVNSVSWLLIRFML
VMVPVVFLLNGITKGEWWDALLFAVAVAVGLTPEMLPMIVSANLAKGAVAMAKRKVVVKR
LNAIQNLGAMDVLCTDKTGTLTQDKIILEHHIDTHGQNNDSVLQLAWLNSFHQSGIKNLM
DQAVIYFSENTPGFVRPQGYRKVDEMPFDFIRRRLSVVVKDPLENHLLVCKGAVEEMLSI
STHMHENGKVVALNPSRRDALLAMANDYNQDGFRVLVVATRAIPKADVKKQYGTDDEHDL
IISGFLTFLDPPKESAGPAIAALRDIGVTVKVLTGDNAIVTSRICRQVGLEPGEPLPGSQ
VERLDDASLRQLVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVG
ISVDSGTDIAKESADIILLEKSLMVLEEGVLKGRETFGNIMKYLNMTASSNFGNVFSVLV
ASAFIPFLPMLAIHLLLQNLMYDISQLALPWDKIDKEFLKKPRKWDAKNIGRFMVWIGPT
SSIFDMTTFALMWFVFSANSESMQTLFQSGWFVEGLLSQTLVVHMLRTRKIPFIQSTAAW
PVMLMTGLVMAVGIYVPFSPLGPIVGLQALPWEYFPWLAGTLLAYCCVAQGMKTMYIRRF
KQWF