Protein Info for EX31_RS00740 in Rahnella sp. WP5

Annotation: malto-oligosyltrehalose synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 836 TIGR02401: malto-oligosyltrehalose synthase" amino acids 4 to 830 (827 residues), 975.9 bits, see alignment E=9.3e-298 PF00128: Alpha-amylase" amino acids 25 to 111 (87 residues), 64.2 bits, see alignment E=8.1e-22

Best Hits

KEGG orthology group: K06044, (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC: 5.4.99.15] (inferred from 99% identity to rah:Rahaq_4875)

Predicted SEED Role

"Malto-oligosyltrehalose synthase (EC 5.4.99.15)" in subsystem Maltose and Maltodextrin Utilization or Trehalose Biosynthesis (EC 5.4.99.15)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.4.99.15

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (836 amino acids)

>EX31_RS00740 malto-oligosyltrehalose synthase (Rahnella sp. WP5)
MKIPTATYRIQFRNGLNFDTATGLIPYLKQLGISHLYASPVFTATSGSTHGYDVTDANEI
DPAIGGREGFDRMAQALKAAGIGLILDIVPNHMAASLENIWWRDVIEHGKKSRYARHFDI
DWSRRLTLPFLGDAFEDALEKGDIVLTPDPKTGQPAFAYFDTYYPVAPGTLTASKTDGLS
KTELTELHERQPYRLMCWRDAPRELSYRRFFEITGLAGVRVEDEVVFDDTHRLILELVRS
GVADGLRVDHVDGLADPKAYLERLREKAGPDCYITVEKILGKGERLPPDWPVSGTTGYEF
IASLSDVLVNDENIAVFSELYDSVVGKPVDMRNELRAAKLMMVEKNFEGEYTTLWKLANS
IAGTGGAMYDENDIRTALRELLIAFPVYRTYGTEQGMPAEDTALLHKILRKVSAPALAVQ
PEILAFLARILCGETSAAAASQAGLFRTRFQQLTGPLMAKSVEDTLFFRQNMELALNEVG
AEPLIRTFSLSRFHTEMIKRREEQPAALSATSTHDTKRGEDARARLFTLTEAPQDWAACV
KRWHRMNESKVIMLPDGPAPRPALTWMLYQALAGAWPVTLTPEDEQGLQELDERFQSFVE
KALREAKLRTNWDNNNEDYEKAVLDYAHHLLSAENRLFLQDFHASIQPFIHAGLVNSLTQ
TVIKLMAPGVPDIYQGSEALNFSLVDPDNRRLPDFTGLARLLRQDDKTGRGQAERKLNGQ
LKQYLVATLAGLRQQKPALFQQGDYVPLSVTGQHAENIIAFARVHNDDAVIVAAPRLVLG
LPARGFPQAEIVLPPHLAYRHYRDLFSDKEITLSDQLDMAVWPGFSPVILIASSPS