Gene info for ECOLIN_RS33520 in Escherichia coli Nissle 1917

Annotation: helix-turn-helix domain-containing protein
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_CP007799, - strand, nucleotides 5,420,862 to 5,421,167
See nucleotide sequence around ECOLIN_RS33520 or for all of scaffold NZ_CP007799

Nearby Genes

500 ntECOLIN_RS27050 and ECOLIN_RS27055 overlap by 8 nucleotidesECOLIN_RS27055 and ECOLIN_RS27060 are separated by 109 nucleotidesECOLIN_RS27060 and ECOLIN_RS27065 are separated by 12 nucleotidesECOLIN_RS27065 and ECOLIN_RS27070 overlap by 8 nucleotidesECOLIN_RS27070 and ECOLIN_RS33520 are separated by 661 nucleotidesECOLIN_RS33520 and ECOLIN_RS33525 are separated by 262 nucleotidesECOLIN_RS33525 and ECOLIN_RS32580 overlap by 31 nucleotidesECOLIN_RS32580 and ECOLIN_RS27080 are separated by 105 nucleotidesECOLIN_RS27080 and ECOLIN_RS27085 are separated by 16 nucleotidesECOLIN_RS27085 and ECOLIN_RS27090 overlap by 4 nucleotides ECOLIN_RS27050: ECOLIN_RS27050 - restriction endonuclease, at 5,413,685 to 5,414,254 _RS27050 ECOLIN_RS27055: ECOLIN_RS27055 - McrC family protein, at 5,414,247 to 5,415,533 _RS27055 ECOLIN_RS27060: ECOLIN_RS27060 - Alw26I/Eco31I/Esp3I family type II restriction endonuclease, at 5,415,643 to 5,417,382 _RS27060 ECOLIN_RS27065: ECOLIN_RS27065 - DNA (cytosine-5-)-methyltransferase, at 5,417,395 to 5,418,585 _RS27065 ECOLIN_RS27070: ECOLIN_RS27070 - Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase, at 5,418,578 to 5,420,200 _RS27070 ECOLIN_RS33520: ECOLIN_RS33520 - helix-turn-helix domain-containing protein, at 5,420,862 to 5,421,167 _RS33520 ECOLIN_RS33525: ECOLIN_RS33525 - transcriptional regulator, at 5,421,430 to 5,421,564 _RS33525 ECOLIN_RS32580: ECOLIN_RS32580 - hypothetical protein, at 5,421,534 to 5,421,683 _RS32580 ECOLIN_RS27080: ECOLIN_RS27080 - DUF957 domain-containing protein, at 5,421,789 to 5,421,965 _RS27080 ECOLIN_RS27085: ECOLIN_RS27085 - DUF5983 family protein, at 5,421,982 to 5,422,470 _RS27085 ECOLIN_RS27090: ECOLIN_RS27090 - TA system toxin CbtA family protein, at 5,422,467 to 5,422,844 _RS27090
Locus Name Description Strand Phenotype
ECOLIN_RS27050 ECOLIN_RS27050 restriction endonuclease + insig.
ECOLIN_RS27055 ECOLIN_RS27055 McrC family protein + insig.
ECOLIN_RS27060 ECOLIN_RS27060 Alw26I/Eco31I/Esp3I family type II restriction endonuclease + no data
ECOLIN_RS27065 ECOLIN_RS27065 DNA (cytosine-5-)-methyltransferase - no data
ECOLIN_RS27070 ECOLIN_RS27070 Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase - no data
ECOLIN_RS33520 ECOLIN_RS33520 helix-turn-helix domain-containing protein - insig.
ECOLIN_RS33525 ECOLIN_RS33525 transcriptional regulator - insig.
ECOLIN_RS32580 ECOLIN_RS32580 hypothetical protein - insig.
ECOLIN_RS27080 ECOLIN_RS27080 DUF957 domain-containing protein - no data
ECOLIN_RS27085 ECOLIN_RS27085 DUF5983 family protein - insig.
ECOLIN_RS27090 ECOLIN_RS27090 TA system toxin CbtA family protein - no data

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