Protein Info for Dsui_3403 in Dechlorosoma suillum PS

Annotation: TIGR02099 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1325 transmembrane" amino acids 36 to 59 (24 residues), see Phobius details amino acids 1257 to 1275 (19 residues), see Phobius details TIGR02099: TIGR02099 family protein" amino acids 35 to 1309 (1275 residues), 882.3 bits, see alignment E=2.8e-269 PF13116: DUF3971" amino acids 543 to 816 (274 residues), 239.4 bits, see alignment E=9.5e-75 PF13502: AsmA_2" amino acids 1059 to 1302 (244 residues), 248 bits, see alignment E=1.5e-77

Best Hits

Predicted SEED Role

"FIG005080: Possible exported protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QKJ4 at UniProt or InterPro

Protein Sequence (1325 amino acids)

>Dsui_3403 TIGR02099 family protein (Dechlorosoma suillum PS)
MTDSVLRSALYHRLHALLPFLVSPRARQFWRRAGRLALVAGVVVYFVFAFLVLALRYWVL
PNVGNYRADIEQAVSQAVGLPVTIGHIDAGWRGLRPELTLADVRVADRQGYPALAFERVE
SVLSWWSVPHLSPRLHLLEISEPTLLVRRLADGRFEVAGIPLEDGKSDGSALHWVLSQER
IHIKDATIVWEDLQRGAPPLTLEAVNFLLENRGRRHRFGLSALPPAELASRLDLRGDLRG
SDPQRLEDWSGELYTEFVHTDLAAWQAWVDYPVSLPQGSGALRLWLEVEKGQPVAATADV
GLQDLRLKLAKDLPELDLLRLAGRISGERRNGDTRFSGKRVGLATRDGTRLEPTDFAFSW
QEGGLFSDRRRGSAAATTLDLGALAALAEHLPLGAEVRQWLNDYAPRGLVRDLKASWTEN
EGKPQDYNLKARFDGLGIKASSRFPGFAGMSGTVDAGDRGGSLTLRSAKAQLELPQVFPD
PRLAVDALNSQVSWKIDGSRLDVSLDSLTFNGPDATGSAQGTYRLSGDGPGSIDLTAGIS
KADGTAVWRYMPKVVSQDARDWLKSSITGGTASEAKLVLKGDLARFPFLDPKDGQFLVTA
RINGATLEYASGWPRIDDIQGSLRFEGARMLIEARSAKLLGARLSGVKAEIADLEAPEEL
LSITGKAEGPTGEFLKFIDQSPVGDKIDNFTDGMKAQGEGRLNLQLELFLRRMADSRIKG
DYEFLNNQVTVEPGLPPITQANGRLHFTDAGISVKEITGQFLGGPMKLSASNEGDKVLVN
ASGSLTAAALRRQLDLPLFDNVSGSAAWKGEVRVRKKTAELVVDSDLKGLASSLPEPFNK
SAAAALPLHLERGALAETAPRKGASAPVAREQVKFTLGKLASAHIIRRREAAGPVTERGA
IAIGEGLSLPERGLALTVNLPSVDADFWRKALTPANGNGGNASSGGSAAAGESAAPLSLA
VLKTPLLDISGRRLHDVTLKAAPAGNSWQVEVNAKEAAGQINWDGAGQGRVKARLKYLTL
PESTPQQEAMQRLGEAESQDELPGLDIVADSFTLGSRRFGKLELLARNEGRVWRLDKVLL
SSPDGSINGKGLWRTDPRGAHRTDVEFRLEAGDAGKYLDRLGFPGTLKRGSATLAGKLAW
NNTPTTLDIPSLSGEVKLTAEKGQFAKVEPGIGKLIGLLSLQSLPRRITLDFRDVFSEGF
AFDNVEGTFKVQNGLMKTSDLSIDGPAAKVGIKGDINLDNETQNLRVRVQPALGSSVALG
TAALVNPVAGVAALIAQKVLQNPVDQIFAFEYAVTGSWEDPKVEKVSAAKADKSEKAKTD
ESAKP