Protein Info for Dsui_3364 in Dechlorosoma suillum PS

Annotation: alanine--tRNA ligase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR00344: alanine--tRNA ligase
  • amino acids 5 to 876 (872 residues), 1033.5 bits, E=0
• PF01411: tRNA-synt_2c
  • amino acids 5 to 577 (573 residues), 713.7 bits, E=2.4e-218
• PF07973: tRNA_SAD
  • amino acids 676 to 718 (43 residues), 58.9 bits, 6e-20
• PF02272: DHHA1
  • amino acids 755 to 893 (139 residues), 111.8 bits, E=5.5e-36

Predicted SEED Role

"Alanyl-tRNA synthetase (EC 6.1.1.7)" (EC 6.1.1.7)

MetaCyc Pathways

• superpathway of chorismate metabolism (48/59 steps found)
• tRNA charging (20/21 steps found)
• shinorine biosynthesis (3/8 steps found)
• enterobactin biosynthesis (5/11 steps found)
• vanchrobactin biosynthesis (2/8 steps found)
• bacillibactin biosynthesis (4/12 steps found)
• ergotamine biosynthesis (4/12 steps found)
• (2S,3E)-2-amino-4-methoxy-but-3-enoate biosynthesis (2/10 steps found)
• superpathway of ergotamine biosynthesis (5/18 steps found)
• sulfazecin biosynthesis (1/16 steps found)
• phosalacine biosynthesis (1/25 steps found)
• phosphinothricin tripeptide biosynthesis (1/25 steps found)
• corallopyronin A biosynthesis (2/30 steps found)
• colibactin biosynthesis (6/38 steps found)

KEGG Metabolic Maps

• Alanine and aspartate metabolism
• Aminoacyl-tRNA biosynthesis

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.1.1.7

Sequence Analysis Tools

See G8QK15 at UniProt or InterPro

Protein Sequence (897 amino acids)

>Dsui_3364 alanine--tRNA ligase (Dechlorosoma suillum PS)
MKSAEIRQKFLDFFASKGHQIVSSSSLVPHEDPTLLFTNAGMNQFKDVFLGFDKRPYTRA
TTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWELLTVVFKLP
KDKLTVTVYAEDDEAYDIWTKEIGVPVERVIRIGDNKGSRYASDNFWMMGDTGPCGPCTE
IFYDHGEHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRDEAGVMHPLPKPSVDTGMGLERI
AAVLQGVHANYEIDLFQRLIAAAARETSGADMDSPSLKVLADHIRACSFLIADGVIPGNE
GRGYVLRRIIRRAIRHGYKLGARAAFFHKMVPDLVAEMGAAYPELASGEKRVMDVLKQEE
ERFFATIEHGMAILDGELKKMLKIEDGQSLHDRIQALAADSNGDVAKLSVGKFDGDVAFK
LHDTYGFPLDLTADVCREHGVTVDTAAFDAAMARQKEQARAAGKFKMAANLEYDGPATTF
HGYDTLEFKGNVLALYKDGVAVNELHEGDMGVVVLDNTPFYAESGGQVGDRGALQSVHGI
FAVEDTQKIQATVFGHHGVVKTGTLTVGNNVTAKVDIQARSRTVRNHSATHLMHKALREV
LGGHVQQKGSQVDPDKTRFDFAHNAPMSDEEIRKVEAIVNAEVLANAATEAQVMGIDDAQ
KSGAMMLFGEKYGDEVRVLSIGSSKELCGGTHVTRTGDIGLFKIVAESGVAAGVRRVEAV
TGDNALALVQQQQAVLAQAAAAFKAPVAELPAKIAQTQEAVKALEKELAKLKSKLASSQG
DDLVNQAVEVKGAKVLAATLEGADVTALRETMDKLKDKLKSAAIVLASTAEGKVTLIAGV
TADLTAKVKAGELVNQVAQQVGGKGGGRPDMAQAGGTQPENLPAALDSVAAWVAGKL