Protein Info for Dsui_3354 in Dechlorosoma suillum PS
Annotation: adenine specific DNA methylase Mod
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: None (inferred from 65% identity to bcb:BCB4264_A0972)Predicted SEED Role
"Type III restriction-modification system methylation subunit (EC 2.1.1.72)" in subsystem Restriction-Modification System (EC 2.1.1.72)
Isozymes
Compare fitness of predicted isozymes for: 2.1.1.72
Use Curated BLAST to search for 2.1.1.72
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See G8QK05 at UniProt or InterPro
Protein Sequence (539 amino acids)
>Dsui_3354 adenine specific DNA methylase Mod (Dechlorosoma suillum PS) MPTLHWVGKNKVVNHHHEVPFRLLDKQYSFTANKGTPANSTNNKIIHGDNLEALKSLLPE FEGKVNCIYIDPPYNTGNEGWVYNDNVNDPKIKKWLGQVVGKEGEDLSRHDKWLCMMYPR LKLLHRLLADEGSMWISIDDAAVTLLRPVMDEIFGAGKLIASNVWQKRYSRENREAIGDV HEYILVYSKTPAAFKLSRNKIPIDEKQAKVYRNPNNDPKGRWRPIPMTAQAGHATADQFY EIISPSGKKFKPSEGRCWGISEATFKTLLSEGRIYFGKKGNSQPNIIRYLSEVEGVVPWT WWPHEEVGNTDEATKDLMAIFGGASGFDTTPKPVRLIERVLQICSQRNSLILDSFGGSGT TAHAVLKLNAQDGGNRRFILCEMMDYAETITAERIRRVIDGYGEGNKVVAGTGGGFDFFK VGEALFKEDKNLNEEVGAEAIRGYVAYTENIPTEKRWDTENAVSPYALGSTDTALCVFYY EKDRVTTLDIDFLGQLKIKNLPSRPEQFVIYADKCALDKDFLYKHGITFKRIPRDITRF