Protein Info for Dsui_3245 in Dechlorosoma suillum PS

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 164 PF04461: DUF520" amino acids 2 to 163 (162 residues), 183.1 bits, see alignment E=2.2e-58

Best Hits

Swiss-Prot: 77% identical to Y3028_DECAR: UPF0234 protein Daro_3028 (Daro_3028) from Dechloromonas aromatica (strain RCB)

KEGG orthology group: K09767, hypothetical protein (inferred from 77% identity to app:CAP2UW1_3080)

Predicted SEED Role

"FIG001943: hypothetical protein YajQ"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QJA8 at UniProt or InterPro

Protein Sequence (164 amino acids)

>Dsui_3245 hypothetical protein (Dechlorosoma suillum PS)
MPSFDFSSEVDMVALKNAVDATGKKIVGRHDFKGTTAKVELNEKDKVITVYGDSDFQLDQ
IKTILFPEMEKKEPDCVKRLDQQAVQKVSGDKVKQDLKIKIGIESELAKKIVKLVKDSKL
KVQAAIQGDTVRVTGAKRDVLQEAIALVKKSITDFPIKYGNFRD