Protein Info for Dsui_3237 in Dechlorosoma suillum PS

Annotation: methyl-accepting chemotaxis protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 547 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details transmembrane" amino acids 194 to 215 (22 residues), see Phobius details PF08269: dCache_2" amino acids 34 to 195 (162 residues), 105.8 bits, see alignment E=3.9e-34 PF17200: sCache_2" amino acids 38 to 194 (157 residues), 119.1 bits, see alignment E=2.6e-38 PF00015: MCPsignal" amino acids 345 to 513 (169 residues), 149 bits, see alignment E=1.9e-47

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QJA0 at UniProt or InterPro

Protein Sequence (547 amino acids)

>Dsui_3237 methyl-accepting chemotaxis protein (Dechlorosoma suillum PS)
MLDQLSLRTRLLAVVLVALLGVLALAAIAAFNTRSLMLDERKGQIRAITQGAYNVVAYYQ
SQEAAGNLSRDEAQAHAKAAVRQIRFNGPDGKSDYFYIWTPDGISVMHALKPEWEGKPMG
DQVKDGSGKLIIRELASLLQNQATTYMDTQFVKKAGDPTMYPKVLYAQKFPAWDWIIGTG
VYIDEVDREFQQTLIYQGLLALVVLALIGSICYLVTRSVLKQIGGEPAAATAIMQQVAGG
NLHAAIGQTQPGSLLHALSQMVLSLRQMLTEIRQDAETLASNSQAISSASSQLADTTGAQ
ADATSSMAAAIEQLTVSSSHISDSAEETQGDSHKAVDLSKQGRERAEQAAEAMQRIAATV
SEGSTRIRTLDQQANQISSIAGVIKDIAGQTNLLALNAAIEAARAGEAGRGFAVVADEVR
KLAERTSSATIEIEQMIASIQSETNNAVQSMDDALPQVEQGVSLAQAAAESLANIEAGAL
RTLEHIQEVANAIREQSAASTSIAQRVEAIAQTVEETSTTMNNTMTSAQDLERVAHNLKG
LVNRFQT