Protein Info for Dsui_3231 in Dechlorosoma suillum PS

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1117 PF08379: Bact_transglu_N" amino acids 6 to 83 (78 residues), 87.5 bits, see alignment 1.2e-28 PF01841: Transglut_core" amino acids 143 to 246 (104 residues), 62 bits, see alignment E=9e-21 PF09899: DUF2126" amino acids 276 to 1112 (837 residues), 1356 bits, see alignment E=0

Best Hits

KEGG orthology group: None (inferred from 72% identity to avn:Avin_04320)

Predicted SEED Role

"Large protein containing transglutaminase-like domain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QJ94 at UniProt or InterPro

Protein Sequence (1117 amino acids)

>Dsui_3231 hypothetical protein (Dechlorosoma suillum PS)
MSIHVALNHVTHYRYDRPIALGPQVIRLRPAPHSRTPILSYSLKVTPGEHFINWQQDPQA
NWLARLVFPEKTREFRVEVDLVAQMSVINPFDFFLEPYAEEVPFAYEAWQRHELAPYLYT
LPATPKFQAYLASISRERCRSVDFLVALNARLARDISYLIRLEPGVQTPEETLAKGSGSC
RDSAWLLCQLLRHLGLAARFVSGYLIQLTADVKSLDGPSGPAADFTDLHAWCEVYLPGAG
WIGLDPTSGLFAGEGHIPLASSPEPSSAAPISGALEPCECEFGHTMGVTRIWEAPRVTKP
YSEEQWSRIEALGQTVDSDLAARDVRLTMGGEPTFVSMDDPDGAEWNTEALGPKKRLLAA
DLFHRLRQKYAPRGFMHFGQGKWYPGEQLPRWSLNCYWRQDGEPLWQRPELYADESRDYG
VDAARAGAFLGEVARRLGLEEKHVFPAYEDAFYYLWRERRLPANVDPFDARLDDPLERAR
LAKVFTRGLEQAVGQVLPLGKTATGRWQSGSWFLRSERCYLIPGDSPVGYRLPLDSQPWV
SQSDYPYLNPPDPAAPRAPLARHAELRRQMPGIPTEAMPGRQAASASPGGLPGEASGERV
PGHHESAAWITRTAMCAEPRNGVLYIFMPPVGCLEDYLEVLAAVEATAEAQGLPVMFEGY
EPPRDPRLEVFRVTPDPGVIEVNIHPAKSWDELVERTSHLYEAARETRLSTEKFMLDGRH
TGTGGGNHFVLGGATPADSPFLRRPDLLRSLISYWHNHPSLSYLFSGLFVGPTSQAPRVD
EARNDSLYELETAFRQFPPPGEGGAPWLTDRLLRNLLIDVTGNTHRAEFCIDKLFSPDGP
TGRLGLLELRAFEMPPHARMSLTQQLLLRALVARFWARPYAPERLARWGTELHDRFMLPH
FIAQDFADVVTEMQAAGYAFDPAWFAPHLEFRFPRIGDFAVRGVAVELRHALEPWHVMGE
EGAAGGTVRYVDSSVERLQVKVTGLPPDRYRLTCNGHAVPLQPTGTVGEFVAGVRYRAWQ
PAACLHPTIGVHAPLTFDLVDTWMDRSLGGCQYHVAHPGGRNFEAFPVNAFEAESRRLAR
FFPMGHTPGPLAGRGQAAAPQNPEFPFTLDLRRQGRP