Protein Info for Dsui_3116 in Dechlorosoma suillum PS
Annotation: ATPase family protein associated with various cellular activities (AAA)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 68% identical to NIRQ_PSEAE: Denitrification regulatory protein NirQ (nirQ) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
KEGG orthology group: K04748, nitric oxide reductase NorQ protein (inferred from 87% identity to eba:ebA183)Predicted SEED Role
"Nitric oxide reductase activation protein NorQ" in subsystem Denitrification
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See G8QI47 at UniProt or InterPro
Protein Sequence (263 amino acids)
>Dsui_3116 ATPase family protein associated with various cellular activities (AAA) (Dechlorosoma suillum PS) MDMASTLPFYDAAADEVEIFEHAWKNRLPLLIKGPTGCGKTRFVAHMAAKLGLPLFTVAC HDDLTAADLVGRHLIGEGKTLWCDGPLTRAVREGGICYLDEVVEARKDTTVVLHPLADDR RILPIDRTGEVLEAPDSFMLVVSYNPGYQNLMKGMKPSTRQRFVSLRFDFPGSAREIAIL RGETGCDEDLAKRLVAIAQALRTLKDQDLEEAASTRLLVYAATLVKAGMDPVTACRAAMV ESLTDDVETAGALMEIVNATFGR