Protein Info for Dsui_2915 in Dechlorosoma suillum PS

Annotation: o-succinylbenzoic acid synthetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 354 PF21508: MenC_N" amino acids 7 to 79 (73 residues), 31.4 bits, see alignment E=2.6e-11 TIGR01927: o-succinylbenzoate synthase" amino acids 10 to 322 (313 residues), 139.5 bits, see alignment E=7.5e-45 PF02746: MR_MLE_N" amino acids 22 to 116 (95 residues), 22.1 bits, see alignment E=2.3e-08 PF13378: MR_MLE_C" amino acids 143 to 348 (206 residues), 112.2 bits, see alignment E=4.4e-36

Best Hits

Predicted SEED Role

"O-succinylbenzoate synthase (EC 4.2.1.113)" (EC 4.2.1.113)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.2.1.113

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QGD3 at UniProt or InterPro

Protein Sequence (354 amino acids)

>Dsui_2915 o-succinylbenzoic acid synthetase (Dechlorosoma suillum PS)
MPLRAFTFVPYRLPFRQQWRSAAGGLDQREGWLVRLEDEDGGYGYGDCAPLPGIGTEPPA
ATAAALIQWQQRFRGQEAAAALEALNDAASFDTPAARAGVESALLDLLARRNGRSLNASI
RGCDCRQRVRVNASLGSLGPHTADALDAALEAGFQVLKLKIGLAPAPQEIPLVQALCQHL
PAGSTLRLDANRAWQEGDARSWLDALAGLPIDALEEPLAQPSAPAWAALQVRAAFPLALD
ESLADLPQAALFDGTVRRLILKLPRLGGFLPAVALAQRFAAAGGDCVVTSSLESACGLLA
AAHLAAALGGDLAHGLATAEWLATDLGAPPPVAAGYLTLPAGPGLGFQPFATPA