Protein Info for Dsui_2565 in Dechlorosoma suillum PS

Annotation: transposase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 336 PF12760: Zn_Tnp_IS1595" amino acids 23 to 70 (48 residues), 60.4 bits, see alignment 1.3e-20 PF12762: DDE_Tnp_IS1595" amino acids 139 to 294 (156 residues), 159.8 bits, see alignment E=5.1e-51

Best Hits

KEGG orthology group: None (inferred from 78% identity to psa:PST_0578)

Predicted SEED Role

"putative transposase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QN76 at UniProt or InterPro

Protein Sequence (336 amino acids)

>Dsui_2565 transposase (Dechlorosoma suillum PS)
MSQHFLLSAQARTMSLRQIFALTDDAAFDYFRHSRWGNGEEVTCPECGSIARHYFISTRK
QWRCRDCKHTFSVTSGTLFAFHKLPLKIYLAAVAIYTNAVKGTSALQLSRDLDVQYKTAF
VLAHKIRESLMVKRDETALDGEVEMDGAYVNGHVRPANKKADRVDRRLAENQNPDKRCVF
VMRSRDNDGPGAKRTLTFVMKQENQADVKKLAGRFVKKGSIVFADEANAYDPLHAYYDTR
RVNHQVEYRSDAGATSNQAESFFSRFRRMQYGQMHRFGTLYLDNYANEAAYREDNRRMSN
GEMFGDIVVKCAASRTSRDFCGYWQGNRRLAERLVS