Protein Info for Dsui_2527 in Dechlorosoma suillum PS

Annotation: transposase, TnpA family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1010 PF13700: DUF4158" amino acids 10 to 173 (164 residues), 120 bits, see alignment E=1e-38 PF01526: DDE_Tnp_Tn3" amino acids 596 to 989 (394 residues), 357.5 bits, see alignment E=7.7e-111

Best Hits

KEGG orthology group: None (inferred from 90% identity to pap:PSPA7_5340)

Predicted SEED Role

"Mobile element protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QN38 at UniProt or InterPro

Protein Sequence (1010 amino acids)

>Dsui_2527 transposase, TnpA family (Dechlorosoma suillum PS)
MIGKSERLTILSDAEQEALYGLPDFDDAQRLEYLALTETELALASSRPGLHAQVYCVLQI
GYFKAKRAFFRFDWSEVEDDCAFVLSRYFHGEPFERKAITKHEHYTQRERVAELFGYRPW
AADFLPQLAQQAEQIVRRDVTLGFVAAELIVWLNGHKIIRPGYTTLQELVSEVLSAERRR
LGSLLAEVLDESAKATLAQLLVRDDTLSQLAALKQDAKDFGWRQMARERGKRATLEPLHG
IAKALLPKLGISQQNLLYYASLANFYTVHDLRNLKADQTRLYLLCYAWVRYRQLTDNLVD
AMAFHMKQLEDESSAGAKQSFVAEQVRRHQETPQVGRLLSLYVDDSVTDPTPFGEVRQRA
YKIMSRDALQSTAQRMSVKPLNKLALHWQAVDGLAERIRRHLRPLYVALGFAGTDPDSPW
LAALAWAKGAFAKQQRLSQRPLAECPAATLPKRLRPYLLTFDADGKPTGLHADRYEFWLY
RQVRKRFQSGELYLDDSLQHRHFSDELVSMDGKADVLAQMDIPFLRQPVDTQLDALAAQL
HAQWLAFNRELKQGKLTHLEYDKDSQKLTWRKPKGENQKAREQAFYEQLPFCDVADVFRF
VNGQCQFLSALTPLQPRYAKKVADADSLMAVIIAQAMNHGNQVMARTSDIPYHVLENTYQ
QYLRQASLHAANDRISNAIAALPIFPHYSFDLDALYGAVDGQKFGVERPTVKARYSRKYF
GRGKGVVAYTLLCNHVPLNGYLIGAHEYEAHHVFDIWYRNTSDIVPTAITGDMHSINKAN
FAILHWFGLRFEPRFTDLDDQLQELYCCADDPALYEKCLIRPVGQIDRQLIVSEKANIDR
IVATLGLKEMTQGTLIRKLCTYTAPNPTRRAIFEFDKLVRSIYTLRYLRDPQLERNVHRS
QNRIESYHQLRSTIAQVGGKKELTGRTDIEIEISNQCARLIANAVIYYNSAILSRLLTKY
EAACNARALELITQISPAAWRHILLNGHYTFQSDGKVIDLDALVAGLELG