Protein Info for Dsui_2491 in Dechlorosoma suillum PS

Annotation: transposase, TnpA family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1009 PF13700: DUF4158" amino acids 11 to 173 (163 residues), 103.2 bits, see alignment E=1.5e-33 PF01526: DDE_Tnp_Tn3" amino acids 596 to 988 (393 residues), 358.2 bits, see alignment E=5e-111

Best Hits

KEGG orthology group: None (inferred from 79% identity to rpi:Rpic_1851)

Predicted SEED Role

"Mobile element protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QML2 at UniProt or InterPro

Protein Sequence (1009 amino acids)

>Dsui_2491 transposase, TnpA family (Dechlorosoma suillum PS)
MMSKSERLTVLSEAEQFALYGMPDFDDGQQLEYLSLSETELALACSRPGLHAKAYCALQI
GYFKAKHAFFRFTWDNAQDDCTFVLTRYFNDQAFEPHAITKHEHYAQRTLIAKLFGYRLW
STDFLPQLVQQAKQIVRRDVTPGFIVAELIVYLNENKIVRPGHTTLQELISEALSAERRR
LGELLGKVLDGEAKAALAQLLVRDDTLSELAALKQDAKSFGWRQMAQEREKRAKLEPLYR
IAKTLLAELAISQQNLHYYASLANFYTVYDLRRLKPEQTHLYLLCYAWQRYRQLTDNLVD
ALGYHMKQLEDESKLRSNKHFLTEQVRRQQETPRVGRLLLLYVDDTVADATPFGDVRQRA
FKIMPKDVLQMAGQRLSVKPASKLALRWQAVDGLAERIRRHLRPLYGALEFSGVVPDNPW
LGALAWVKGVYAKQQRLSQRPLAECPEATLPKRLRPYLLTFDADGRPLGLHADRYEFWLY
RQLRKRFKSGEIYLDDSLQHRCFTDELVSLDEKASILGQMDIPWLRQPIGAQLDALKAEL
HEQWLAFNRELRQGKLKHLDYDSERKTLTWRRPKAGNDAAQQNSFYEQLSFCDVGDVFRF
VNGQCQFLSALTPLQPRYAKQVADSDSLMAGIIAQAMNHGNLVMSRTSDIPYHVLEATYQ
QYLRQASLQAANDRISNAIAELPIFPHYSFDLGTLYGAVDGQKFGVERPTVKARHSRKYF
GRGKGVVAYTLLCNHVPLQSWIIGAHEFEAHHVFDIWYRNTSDIVPTTITGDMHSVNKAN
FAILYWFGLRFEPRFTDLEEQLKELYCADDPALYEKCLIRPVGQIDLPAVVDEKTNIDQI
VATLGLKEMTQGTLIRKLCTYTASNPTRRAIFEFDKLIRSIYTLRYLRDPQVERNVHRSQ
NRIESYHQLRSAIAQVGGKKELTGRTDIEIEISNQCARLIANTIIYYNSAILSRLLTKCE
TTGSEKTLTLLKKISPAAWRHIHLNGHYTFHGDGQVIDLDAIVAGLELG