Protein Info for Dsui_2393 in Dechlorosoma suillum PS

Annotation: uncharacterized domain HDIG-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 407 PF11871: DUF3391" amino acids 2 to 132 (131 residues), 125.6 bits, see alignment E=3.1e-40 PF13487: HD_5" amino acids 157 to 318 (162 residues), 104.3 bits, see alignment E=9.6e-34 TIGR00277: HDIG domain" amino acids 163 to 255 (93 residues), 27.7 bits, see alignment E=9.3e-11 PF01966: HD" amino acids 164 to 286 (123 residues), 57 bits, see alignment E=3.6e-19

Best Hits

KEGG orthology group: None (inferred from 46% identity to alv:Alvin_1380)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QLW3 at UniProt or InterPro

Protein Sequence (407 amino acids)

>Dsui_2393 uncharacterized domain HDIG-containing protein (Dechlorosoma suillum PS)
MIKKIPVAQIRVGMYVSDVNAGWMDHPFLRNSLLLEDQEQVLKIRRAGIREVFIDTAKGL
DVDDVPTAQEAARSSQQDLERMAEAPENKAPPPRTSLAEELAKAKGAFNEGARLVRSVMD
NARLGRQIEMESVKLAVEKITNSVIRNSNAMFTLRRLQQRDDYTYQHSVGVCAMLAAFAK
AMDMDLATIHQVALGGLLHDIGYVRIHAEILAKPGKLTDEEYLHVKSHVVQGSDILHQTA
GIPQLAFDIMEHHHERFDGSGYPRGLKGEEISQVGRMAAIVDVYDAITTDRVYHRGVNPG
EAMRKLFDWSKYHFDPALFQIFVKSIGIYPVGTLVRLESERLGVVVEQREKNLLQPLVRV
IYDAKRQYYLPPQDVDLSRPFGHGGGDRIVTHESPLKWGIDVNRFLS