Protein Info for Dsui_2319 in Dechlorosoma suillum PS

Annotation: transcriptional regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 319 PF12802: MarR_2" amino acids 36 to 92 (57 residues), 45.2 bits, see alignment E=3e-15 PF01047: MarR" amino acids 39 to 92 (54 residues), 34.9 bits, see alignment 3.9e-12 PF13463: HTH_27" amino acids 43 to 101 (59 residues), 28.7 bits, see alignment E=4.5e-10 PF09339: HTH_IclR" amino acids 49 to 79 (31 residues), 23.7 bits, see alignment (E = 1.2e-08) PF00583: Acetyltransf_1" amino acids 195 to 292 (98 residues), 51.6 bits, see alignment E=3.8e-17 PF13673: Acetyltransf_10" amino acids 198 to 301 (104 residues), 40.2 bits, see alignment E=1.1e-13 PF13508: Acetyltransf_7" amino acids 209 to 293 (85 residues), 44.1 bits, see alignment E=7.9e-15

Best Hits

KEGG orthology group: None (inferred from 56% identity to ctt:CtCNB1_2588)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QL23 at UniProt or InterPro

Protein Sequence (319 amino acids)

>Dsui_2319 transcriptional regulator (Dechlorosoma suillum PS)
MADPEQALVDGIRAASRQMVRELGFMQATLAATDYPASAVHALIELGKHGSMSAAAIAAC
LGLDKSSVSRMLRKLVDAGELTETVSDHDGRIKNLSLTGRGRRTLAAVEAYGRRQVEEAL
QHMAPEARGLVHAGLEAYARALAQARSGAAGAVISPVRICPGYRVGVIGRVTEMHGLFYA
RHAGFGQYFESQVATGLAEFCGRLQRPGNGLWVALQGERIVGSVAIDGEDLGPGLAHLRW
FIVDGAVRGGGVGQRLLQAALAHCDGYGFAETRLWTFAGLEAARHLYEARGFVLGEERQG
RQWGETVTEQLFVRPGVAG