Protein Info for Dsui_2011 in Dechlorosoma suillum PS

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 878 PF13166: AAA_13" amino acids 384 to 696 (313 residues), 52.7 bits, see alignment E=3.3e-18

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QIH0 at UniProt or InterPro

Protein Sequence (878 amino acids)

>Dsui_2011 hypothetical protein (Dechlorosoma suillum PS)
MSILQEILNWTKELPEWQSDAVARLLIKQTLKIEDQDDLFALLKAAHGIPDPKDRQPKPL
TEDQIPAPVQATTHVELRAIKSMQHVNAIAENRRLPFGASGMTVIYGDNGSGKSGYSRVL
KRVCRARDQTEAIHPNANLPAGKAGTPEATFEIAIDGVAQDAHWQHGNAAPAALSSFAIF
DSRCARAYLDREDDFSYVPYGLDVFEGLAKVCKQLKTAIEAEYAQSATDLSAFAPLQGDT
PVGKLVASLSAKTTLAQIEALATVTPEELTQHASLDKSLKENNPKEKATQLRLRARRITA
IAANASGKGAQVDQAVVAKLKGLADSYRTAQSAAALAAKQFKEGENLLQGTGGETWRELF
EAARKFAIESHPDKAFPALGADAPCPLCQQPLAGGSDRLLRFEAFIQQEAEKTSQARRVA
LYSEYKQFAAQVLTLNLDDVTYGEIEALDPQLAADTKAFEPLLTARQEAIKAAVISHQWD
DVSQPLVNPTERLQALADKQNAEAVTLEKASDEKTRATLQKQFLELDARVRLSQVKDAVV
TAVNRLAHQAKLTKCLSAVKTNAISLKASELAEKVISKELADALNREFKALGVGTLRVSL
QSRSDKGKALHKLKLELPQSRSPGEILSEGEQRAIAIGSFLAEVGLSGGKGGIVFDDPVS
SLDHRRRERVAKRLTAEAAQRQVVVFTHDIYFLCLLVEEAKLAGVPIATQSLTRRAEGFG
VADPDLPFEGKTASKRISALKAQHQAIAKLHKDGEEQEHRRQTVDAYFRLRMAWERAVEE
VLLREVILRFRKGVETQRLAGVVVEDDDYAQVTAGMTKCSNYAHDKALMGGIAVPEPDEL
LSDIMALESWRGKVETRNMNTAKKRKAGPAVASLAAVP