Protein Info for Dsui_1607 in Dechlorosoma suillum PS

Annotation: putative membrane-associated protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 325 transmembrane" amino acids 16 to 41 (26 residues), see Phobius details amino acids 51 to 71 (21 residues), see Phobius details amino acids 104 to 125 (22 residues), see Phobius details amino acids 135 to 158 (24 residues), see Phobius details amino acids 173 to 192 (20 residues), see Phobius details PF09335: SNARE_assoc" amino acids 31 to 155 (125 residues), 45.3 bits, see alignment E=1.2e-15 PF00581: Rhodanese" amino acids 208 to 302 (95 residues), 26 bits, see alignment E=1.1e-09

Best Hits

KEGG orthology group: None (inferred from 63% identity to dar:Daro_1389)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QPT7 at UniProt or InterPro

Protein Sequence (325 amino acids)

>Dsui_1607 putative membrane-associated protein (Dechlorosoma suillum PS)
MDLAQLTDALQRDAAWVVFLNVLLQQLGLPVPAVPTLLLAGSLAASPLHGLQLLAVAVLA
SVLADWVWYLAGRSFGYRVLAGLCRLSINPGSCVSATEARFTRWGAWSLVLAKFIPGFST
VAPPIAGSLRLALPSFLAAAALGAALWAGGAILAGWWLRGELQQVLARLQGNGNLALTLL
LALLGLWLGWKFWQKYRFEKLSAIPHLTPAELADALQSAAPPLFLDLRGEAMIRETGLLP
GATAATLDDPAERAAHWPREALVATLCNCPADASAVQAARRLMALGYRNVRPVRGGYEAW
LALQAGGGAMAAVADEASSGGLSRP