Protein Info for Dsui_1492 in Dechlorosoma suillum PS

Annotation: ATPase with chaperone activity, ATP-binding subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 949 PF02861: Clp_N" amino acids 123 to 171 (49 residues), 31.8 bits, see alignment 8.7e-11 amino acids 199 to 248 (50 residues), 53.3 bits, see alignment 1.6e-17 PF00004: AAA" amino acids 307 to 430 (124 residues), 55.8 bits, see alignment E=4.4e-18 amino acids 647 to 775 (129 residues), 36.7 bits, see alignment E=3.5e-12 PF17871: AAA_lid_9" amino acids 449 to 547 (99 residues), 110.9 bits, see alignment E=1.8e-35 PF07724: AAA_2" amino acids 641 to 810 (170 residues), 224.2 bits, see alignment E=6.6e-70 PF00158: Sigma54_activat" amino acids 643 to 769 (127 residues), 28.7 bits, see alignment E=6.8e-10 PF07728: AAA_5" amino acids 646 to 767 (122 residues), 41.9 bits, see alignment E=6.8e-14 PF10431: ClpB_D2-small" amino acids 816 to 893 (78 residues), 76.4 bits, see alignment E=9.1e-25

Best Hits

KEGG orthology group: K03696, ATP-dependent Clp protease ATP-binding subunit ClpC (inferred from 98% identity to adk:Alide2_2061)

Predicted SEED Role

"ATP-dependent Clp protease ATP-binding subunit ClpA" in subsystem Proteolysis in bacteria, ATP-dependent

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QP30 at UniProt or InterPro

Protein Sequence (949 amino acids)

>Dsui_1492 ATPase with chaperone activity, ATP-binding subunit (Dechlorosoma suillum PS)
MTRKQCQVCGQPATVRVEANLNGRHSTMLLCDDHYRQLARQQKRTVSPLEALFGSRSGLF
EDFLGSDFFRVGDDAPSVAADADEVVDASFGESAPATAGTARRRGSGLASRISEQSEALL
QEAAKHAAEFGRPEVDTEHLLLALTDSDVVKTILGQFKIKVDDLKRQIESEAKRGDKPFE
GEIGVSPRVKDALSRAFVASNELSHSYVGPEHFLIGLAEEGEGLAANLLRRYGLTPQALR
QQVSKVVGKGAEDGRAETPTNTPELDKYSRDLTKMAREGKLDPVIGRAQEIETTIEVLAR
RKKNNPVLIGEPGVGKTAIVEGLAQRMVAGEVPETLRDKRLVELNINAMVAGAKYRGEFE
ERVQKVLKEVTEHQGELILFIDEVHTIVGAGQGGGEGGLDVANVFKPMMARGELNLIGAT
TLNEYQKYIEKDAALERRFQPVMVPEPTVAQTMMILRGLRDTFEAHHKVSITEDAIIAAA
ELSDRYITARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELHQLRREQDYMASRKQ
YDKAAELGKRIEAKETELKKLVEEWERERASGSAEVKAEHVAQIVSRLTGIPVNELTVEE
REKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTELA
KALAESIYGDEGALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLL
LDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAA
GEEYEKTKSEVMDVLRGHFRPEFLNRIDEIIVFHALGKEEIRHIVGLQLDRVARNAASQG
VTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSELETALAREMLGGGIGKADHASARWDD
KAERVVFERQEPPAKPAEPEKPDAANAAETPPSDASKPARKKKSAGGES