Protein Info for Dsui_1220 in Dechlorosoma suillum PS

Annotation: gamma-glutamyl phosphate reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 418 PF00171: Aldedh" amino acids 12 to 280 (269 residues), 51.8 bits, see alignment E=2.5e-18 amino acids 310 to 375 (66 residues), 32 bits, see alignment E=2.5e-12 TIGR00407: glutamate-5-semialdehyde dehydrogenase" amino acids 14 to 407 (394 residues), 485.7 bits, see alignment E=4.8e-150

Best Hits

Swiss-Prot: 81% identical to PROA_DECAR: Gamma-glutamyl phosphate reductase (proA) from Dechloromonas aromatica (strain RCB)

KEGG orthology group: K00147, glutamate-5-semialdehyde dehydrogenase [EC: 1.2.1.41] (inferred from 81% identity to dar:Daro_0540)

Predicted SEED Role

"Gamma-glutamyl phosphate reductase (EC 1.2.1.41)" in subsystem Proline Synthesis (EC 1.2.1.41)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.2.1.41

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QLN0 at UniProt or InterPro

Protein Sequence (418 amino acids)

>Dsui_1220 gamma-glutamyl phosphate reductase (Dechlorosoma suillum PS)
MDIKDYMQNLGRRARAASRQMAKADTNAKNRALLAIAAAIRRDEAKLLAANGEDLAAARA
AGLEPAMVDRLTLSPKTVATMAEGLEQIASLPDPIGEMTDLRFRPSGIQVGHMRVPLGVI
GIIYEARPNVTVDAAGLCIKSGNASILRGGSEAIRCNQALATLVKEGLQSAGLPADAVQV
VETTDRAAVGELITMREFVDVIVPRGGKGLIARLLAESRVPMIQHLDGNCHVYLDDSADA
AKAMAVVENSKTQRYGTCNTAESLLVARSVAATLLPPIAAMLTAKGVEIRGCAETRALVP
NAKEATEADWGEEYLAPIIAVKVVAGLDEAIEHINKYSSSHTEAIVTENHTHAMRFLREV
DSASVMVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWVVLGNGQVRG