Protein Info for Dsui_1143 in Dechlorosoma suillum PS

Annotation: phage integrase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 636 transmembrane" amino acids 107 to 125 (19 residues), see Phobius details amino acids 394 to 410 (17 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QKU0 at UniProt or InterPro

Protein Sequence (636 amino acids)

>Dsui_1143 phage integrase family protein (Dechlorosoma suillum PS)
MSTLANPAKPIRALSSAEKARTPVSMAKTDLGESVVVSRYEDEIWDFWPYIPQNNARDSE
KRINWRIEIAPGEFLTDHQHAPLLESTKDFTWSLFIDPIDGRQRPRMATVIAHVVALTPL
LRWMASRGMRQFRDIEGRALEYVPIAKINQRTGKPTAKGWHARRLIVLEELYLQREKLAD
ALPTHPWPDESGFTLSGERAKGRTIKTLRIPERTVRQLAEVAINYVTNLAPHILSTRDAL
EQAVANKEGFQATNIRIPLARELGFEGSRDLSAELSYLRDSCYIVIAMFSGIRDSETLSL
KRGCIAHDKADDGIDLIWLHGTIFKTGIKPHKWLVPPIVETAVRVMEWYRQPYAIQIEEQ
ISQFEQQLDMSIPGSTFHKRQLKRLHTARKDRDGLFLGCAPCVGHLVGVLSKSTIHRRLQ
NFCPHFNILGDDGKYWRLSSHQFRRTYAYFVASAELGDLHYLREHFGHWSIDMTLLYTSG
ASDAYQTDTDLLTEILRSKTEKQESVLHNYLMTDAPLANGDIMLADLRQTIKTAKNKQSL
LQQISSSITLNGTGHSWCIGNAKGTSCGGLCVFEADMCVDCAYGMIGPEHLPVWKEIALQ
QQTALDMSDLGLPGKTRSQRILNKALDVIAKLEIPQ