Protein Info for Dsui_1062 in Dechlorosoma suillum PS

Annotation: ammonia permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 401 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 47 to 69 (23 residues), see Phobius details amino acids 89 to 108 (20 residues), see Phobius details amino acids 117 to 137 (21 residues), see Phobius details amino acids 157 to 179 (23 residues), see Phobius details amino acids 200 to 219 (20 residues), see Phobius details amino acids 229 to 250 (22 residues), see Phobius details amino acids 257 to 275 (19 residues), see Phobius details amino acids 281 to 299 (19 residues), see Phobius details amino acids 311 to 331 (21 residues), see Phobius details amino acids 343 to 367 (25 residues), see Phobius details PF00909: Ammonium_transp" amino acids 12 to 392 (381 residues), 282.1 bits, see alignment E=3.3e-88

Best Hits

KEGG orthology group: None (inferred from 80% identity to app:CAP2UW1_0261)

Predicted SEED Role

"Ammonium transporter" in subsystem Ammonia assimilation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QK31 at UniProt or InterPro

Protein Sequence (401 amino acids)

>Dsui_1062 ammonia permease (Dechlorosoma suillum PS)
MEAYKSASDTLFVLLGAIMVLAMHAGFAFLELGTVRRKNQVNALVKILSDFAVSTLAYFF
VGYGIAYGVHFFQDAQALMQNSGHDLTKFFFLLTFAAAIPAIISGGIAERARFNPQLAAT
FCLVGFVYPFFEGIAWNHAFGIQEWLLASFGAEFHDFAGSVVVHAMGGWIALPAVLLLGA
RRGRYHKDGGIAGAHPPSSIPFLALGAWILIVGWFGFNVMSAQSLDKISGLVALNSLMAM
VGGTLAALVLGKNDPGFVHNGPLAGLVAVCAGSDLMHPLGALVTGGVAGALFVVMFTLTQ
NRWKIDDVLGVWPLHGLCGAWGGIAAGIFGLEALGGAGGVSFLSQLLMTGLAIVIALVGG
GLVYGVIKQLVGIRLDQEDEYNGADLSIHKITASAERETLW