Protein Info for Dsui_1060 in Dechlorosoma suillum PS

Annotation: putative ATPase (AAA+ superfamily)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 307 PF05673: DUF815" amino acids 50 to 300 (251 residues), 359.8 bits, see alignment E=6e-112 PF00004: AAA" amino acids 104 to 202 (99 residues), 27 bits, see alignment E=5.6e-10

Best Hits

KEGG orthology group: K06923, (no description) (inferred from 70% identity to app:CAP2UW1_0259)

Predicted SEED Role

"putative ATP/GTP-binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See G8QK29 at UniProt or InterPro

Protein Sequence (307 amino acids)

>Dsui_1060 putative ATPase (AAA+ superfamily) (Dechlorosoma suillum PS)
MPSPAKTPRTAAAVADPLERLVRFLDTAEALLARLEPLLPEALPQPDWKAPAYRWRRKNG
RGFLQAVAQPHPIRLKDLQDIDDQKQRIVANTRQFLAGRPANNVLLTGTRGCGKSSLVKA
LLNEYAKKGLRLIEVDKSDLVDLPDIVDMVAGRPEHFIIFSDDLSFEAGEDGYKALKSVL
DGSVTSVPDNVLIYATSNRRHLMPEYHAENLETSKVGDEIHPGEAIEEKISLSERFGLWI
SFYPFSQDDYLNITAHWLAHFGCAAAARESWERDALNWALQRGSRSGRVAWQFARDYAGS
HAPKGGK